Factsheet for TraesCS7B01G413400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G413500.1	Wheat	mitochondrion, plastid	57.45	80.2
TraesCS7D01G494800.1	Wheat	plastid	73.05	78.03
TraesCSU01G098500.1	Wheat	plastid	79.43	74.17
TraesCS7A01G506100.1	Wheat	plastid	78.72	72.08
TraesCS7A01G506700.1	Wheat	plastid	82.98	68.02
TraesCS7B01G415000.1	Wheat	plastid	67.38	67.38
Os06t0650900-02	Rice	plastid	56.03	55.63
Zm00001d046813_P003	Maize	plastid	57.45	52.6
Zm00001d046812_P001	Maize	plastid	57.45	52.6
EER90130	Sorghum	plastid	58.16	48.24
EES05389	Sorghum	plastid	46.81	43.14
TraesCS7B01G414800.1	Wheat	nucleus	73.76	35.14
VIT_09s0018g00620.t01	Wine grape	plastid	36.17	33.55
GSMUA_Achr2P05050_001	Banana	plastid	33.33	32.19
KRH47322	Soybean	plastid	32.62	29.49
PGSC0003DMT400036852	Potato	plastid	30.5	26.54
PGSC0003DMT400073306	Potato	cytosol	30.5	26.54
Solyc06g068500.2.1	Tomato	plastid	29.79	25.93
CDY22291	Canola	plastid	27.66	25.83
Solyc03g117590.2.1	Tomato	plastid	29.08	25.47
KRH44579	Soybean	plastid	25.53	25.35
Bra008430.1-P	Field mustard	plastid	26.95	25.17
Bra035143.1-P	Field mustard	plastid	27.66	24.07
CDX88567	Canola	plastid	26.95	23.46
CDX87353	Canola	plastid	26.95	23.46
AT1G80920.1	Thale cress	plastid	26.24	22.7
CDX67975	Canola	plastid	25.53	22.22
CDX79343	Canola	plastid	25.53	22.22
Bra003592.1-P	Field mustard	plastid	25.53	22.22

Protein Annotations

EnsemblPlants:TraesCS7B01G413400.1	EnsemblPlantsGene:TraesCS7B01G413400	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR24074	PANTHER:PTHR24074:SF12	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:23.1.2.5	:	:

Description

No Description!

Coordinates

chr7B:+:681750543..681750983

Molecular Weight (calculated)

16151.9 Da

IEP (calculated)

9.082

GRAVY (calculated)

-0.833

Length

141 amino acids

Sequence
(BLAST)

001: MATRGGVVLN LRVPSASVAP ARRCGTASSS VRCGSARGAA PARHTEDHYR TLRLQPGATR GEVKKAFHRL ALQYHPDVVR QENSVDFERI NAAYQRVMSN
101: MREAEATLEY WRRRYGLADK DLDRYRHYPN EEDEDDWFAD L

Best Arabidopsis Sequence Match ( AT1G80920.1 )
(BLAST)

001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA

Arabidopsis Description

ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.