CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	golgi, nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046813_P003	Maize	plastid	68.82	75.97
Zm00001d046812_P001	Maize	plastid	68.82	75.97
Os06t0650900-02	Rice	plastid	54.71	65.49
TraesCS7B01G413400.1	Wheat	mitochondrion, plastid	48.24	58.16
TraesCS7D01G494800.1	Wheat	plastid	44.71	57.58
TraesCSU01G098500.1	Wheat	plastid	50.59	56.95
EES05389	Sorghum	plastid	50.59	56.21
TraesCS7B01G415000.1	Wheat	plastid	46.47	56.03
TraesCS7D01G494900.1	Wheat	plastid	48.24	55.78
TraesCS7D01G495200.1	Wheat	plastid	49.41	54.9
TraesCS7B01G413500.1	Wheat	mitochondrion, plastid	32.35	54.46
TraesCS7A01G506100.1	Wheat	plastid	47.06	51.95
TraesCS7A01G506000.1	Wheat	plastid	47.65	51.59
TraesCS7D01G494100.1	Wheat	plastid	30.0	51.52
TraesCS7D01G494000.1	Wheat	plastid	47.06	50.96
HORVU7Hr1G113460.1	Barley	plastid	47.65	50.94
HORVU7Hr1G113530.1	Barley	plastid	47.65	50.94
TraesCS7A01G506700.1	Wheat	plastid	47.65	47.09
GSMUA_Achr2P05050_001	Banana	plastid	28.82	33.56
VIT_09s0018g00620.t01	Wine grape	plastid	27.65	30.92
Bra035143.1-P	Field mustard	plastid	28.24	29.63
CDY22291	Canola	plastid	25.88	29.14
CDX87353	Canola	plastid	27.65	29.01
CDX88567	Canola	plastid	27.65	29.01
KRH47322	Soybean	plastid	26.47	28.85
AT1G80920.1	Thale cress	plastid	27.65	28.83
CDX79343	Canola	plastid	27.06	28.4
PGSC0003DMT400036852	Potato	plastid	27.06	28.4
TraesCS7D01G495500.1	Wheat	plastid	47.65	28.22
Bra008430.1-P	Field mustard	plastid	24.71	27.81
Bra003592.1-P	Field mustard	plastid	26.47	27.78
Solyc06g068500.2.1	Tomato	plastid	26.47	27.78
PGSC0003DMT400073306	Potato	cytosol	26.47	27.78
CDX67975	Canola	plastid	26.47	27.78
TraesCS7B01G414800.1	Wheat	nucleus	48.24	27.7
Solyc03g117590.2.1	Tomato	plastid	24.71	26.09
KRH44579	Soybean	plastid	21.18	25.35

Protein Annotations

EnsemblPlants:EER90130	EnsemblPlantsGene:SORBI_3010G210600	EntrezGene:8069346	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR24074	PANTHER:PTHR24074:SF12	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	ProteinID:EER90130	ProteinID:EER90130.1	RefSeq:XP_002438763.1	SEG:seg	SMART:SM00271
SUPFAM:SSF46565	unigene:Sbi.8567	UniParc:UPI0001A89AE6	UniProt:C5Z740	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr10:-:55412773..55414336

Molecular Weight (calculated)

18827.0 Da

IEP (calculated)

9.100

GRAVY (calculated)

-0.728

Length

170 amino acids

Sequence
(BLAST)

001: MAVGGGVCVA SPSSSPSSSV EAPWGTRRTR TTTTTSGARR GAAAAATSVR CSIVGEAGGP GASGRLAEDP YRTLRLRPGA TRGEVKKAFR RLALMYHPDV
101: RKEKGRESDG VSDVQFQRIN VAYQMVMSSM READERLEYW RLKYGLTDED LDRYRHHLNQ EHGDDDWFDM

Best Arabidopsis Sequence Match ( AT1G80920.1 )
(BLAST)

001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA

Arabidopsis Description

ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.