Factsheet for Zm00001d046812_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046813_P003	Maize	plastid	100.0	100.0
EER90130	Sorghum	plastid	75.97	68.82
Os06t0650900-02	Rice	plastid	58.44	63.38
TraesCS7B01G413500.1	Wheat	mitochondrion, plastid	38.31	58.42
TraesCS7D01G494800.1	Wheat	plastid	50.0	58.33
TraesCSU01G098500.1	Wheat	plastid	57.14	58.28
TraesCS7B01G413400.1	Wheat	mitochondrion, plastid	52.6	57.45
TraesCS7D01G494100.1	Wheat	plastid	35.71	55.56
TraesCS7B01G415000.1	Wheat	plastid	50.0	54.61
TraesCS7D01G494900.1	Wheat	plastid	51.95	54.42
TraesCS7D01G495200.1	Wheat	plastid	53.9	54.25
EES05389	Sorghum	plastid	53.9	54.25
TraesCS7A01G506100.1	Wheat	plastid	51.3	51.3
TraesCS7D01G494000.1	Wheat	plastid	51.3	50.32
TraesCS7A01G506000.1	Wheat	plastid	49.35	48.41
TraesCS7A01G506700.1	Wheat	plastid	52.6	47.09
HORVU7Hr1G113530.1	Barley	plastid	48.05	46.54
HORVU7Hr1G113460.1	Barley	plastid	48.05	46.54
VIT_09s0018g00620.t01	Wine grape	plastid	31.17	31.58
GSMUA_Achr2P05050_001	Banana	plastid	29.87	31.51
KRH47322	Soybean	plastid	29.22	28.85
CDY22291	Canola	plastid	27.27	27.81
PGSC0003DMT400073306	Potato	cytosol	29.22	27.78
TraesCS7D01G495500.1	Wheat	plastid	51.3	27.53
TraesCS7B01G414800.1	Wheat	nucleus	51.95	27.03
Solyc03g117590.2.1	Tomato	plastid	27.92	26.71
PGSC0003DMT400036852	Potato	plastid	27.92	26.54
Bra035143.1-P	Field mustard	plastid	27.92	26.54
Solyc06g068500.2.1	Tomato	plastid	27.27	25.93
CDX88567	Canola	plastid	27.27	25.93
CDX87353	Canola	plastid	27.27	25.93
CDX79343	Canola	plastid	27.27	25.93
Bra008430.1-P	Field mustard	plastid	25.32	25.83
AT1G80920.1	Thale cress	plastid	27.27	25.77
CDX67975	Canola	plastid	26.62	25.31
Bra003592.1-P	Field mustard	plastid	26.62	25.31
KRH44579	Soybean	plastid	22.73	24.65

Protein Annotations

EnsemblPlants:Zm00001d046812_P001	EnsemblPlants:Zm00001d046812_T001	EnsemblPlantsGene:Zm00001d046812	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR24074	PANTHER:PTHR24074:SF12	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	ProteinID:AQL05048.1	ProteinID:AQL05050.1	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI000189D089	UniProt:K7VBI4	MapMan:35.2	:	:	:

Description

Chaperone protein dnaJ 8 chloroplastic

Coordinates

chr9:+:106814732..106815905

Molecular Weight (calculated)

17666.8 Da

IEP (calculated)

8.822

GRAVY (calculated)

-0.818

Length

154 amino acids

Sequence
(BLAST)

001: MAVGGGVCVA SPSPSSVEAW SWRTSGARRR AAVRCSVVGE AGPGAAGGRV EDPYRTLRLR RGATRGEVKK AFRRLALMYH PDVRKERERE MECDGDSGVQ
101: FQRINVAYQR LMSSMREADE RLEYWRLKYG LADEDLDRYR RRLNEEDADD WFDM

Best Arabidopsis Sequence Match ( AT1G80920.1 )
(BLAST)

001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA

Arabidopsis Description

ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.