Factsheet for TraesCSU01G098500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G495200.1	Wheat	plastid	89.4	88.24
TraesCS7B01G415000.1	Wheat	plastid	74.17	79.43
TraesCS7B01G413400.1	Wheat	mitochondrion, plastid	74.17	79.43
TraesCS7B01G413500.1	Wheat	mitochondrion, plastid	52.32	78.22
TraesCS7A01G506100.1	Wheat	plastid	70.86	69.48
TraesCS7A01G506700.1	Wheat	plastid	76.82	67.44
Zm00001d046813_P003	Maize	plastid	58.28	57.14
Zm00001d046812_P001	Maize	plastid	58.28	57.14
Os06t0650900-02	Rice	plastid	51.66	54.93
EER90130	Sorghum	plastid	56.95	50.59
EES05389	Sorghum	plastid	50.33	49.67
VIT_09s0018g00620.t01	Wine grape	plastid	35.76	35.53
KRH47322	Soybean	plastid	33.11	32.05
PGSC0003DMT400036852	Potato	plastid	31.79	29.63
CDY22291	Canola	plastid	29.14	29.14
Solyc06g068500.2.1	Tomato	plastid	31.13	29.01
GSMUA_Achr2P05050_001	Banana	plastid	27.81	28.77
Bra008430.1-P	Field mustard	plastid	28.48	28.48
PGSC0003DMT400073306	Potato	cytosol	29.8	27.78
KRH44579	Soybean	plastid	25.83	27.46
Solyc03g117590.2.1	Tomato	plastid	28.48	26.71
AT1G80920.1	Thale cress	plastid	27.15	25.15
CDX79343	Canola	plastid	26.49	24.69
CDX67975	Canola	plastid	26.49	24.69
Bra035143.1-P	Field mustard	plastid	26.49	24.69
Bra003592.1-P	Field mustard	plastid	26.49	24.69
CDX88567	Canola	plastid	25.83	24.07
CDX87353	Canola	plastid	25.83	24.07

Protein Annotations

EnsemblPlants:TraesCSU01G098500.1	EnsemblPlantsGene:TraesCSU01G098500	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR24074	PANTHER:PTHR24074:SF12	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:23.1.2.5

Description

No Description!

Coordinates

chrUn:-:87231917..87232372

Molecular Weight (calculated)

17238.3 Da

IEP (calculated)

8.675

GRAVY (calculated)

-0.642

Length

151 amino acids

Sequence
(BLAST)

001: MAVAVGGGVV LSLRVPSSSA WPAVGPRRRV SSSAAVRCGA TREKRPAVSP GVGLEEDHYR TLRLAPGATR GEVKKAFHRL ALQYHPDVVR QENCVDFERI
101: NAAYQRVMSN MREAEARLEY WRRRYGLADE DLDRYRRYLN EEDEDDWFAD L

Best Arabidopsis Sequence Match ( AT1G80920.1 )
(BLAST)

001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA

Arabidopsis Description

ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.