Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G098500.1 | Wheat | plastid | 88.24 | 89.4 |
| TraesCS7D01G494100.1 | Wheat | plastid | 49.67 | 76.77 |
| TraesCS7D01G494000.1 | Wheat | plastid | 77.78 | 75.8 |
| TraesCS7D01G494800.1 | Wheat | plastid | 65.36 | 75.76 |
| TraesCS7D01G494900.1 | Wheat | plastid | 69.93 | 72.79 |
| Os06t0650900-02 | Rice | plastid | 50.33 | 54.23 |
| Zm00001d046813_P003 | Maize | plastid | 54.25 | 53.9 |
| Zm00001d046812_P001 | Maize | plastid | 54.25 | 53.9 |
| EER90130 | Sorghum | plastid | 54.9 | 49.41 |
| EES05389 | Sorghum | plastid | 47.06 | 47.06 |
| TraesCS7D01G495500.1 | Wheat | plastid | 80.39 | 42.86 |
| VIT_09s0018g00620.t01 | Wine grape | plastid | 33.99 | 34.21 |
| CDY22291 | Canola | plastid | 29.41 | 29.8 |
| Bra008430.1-P | Field mustard | plastid | 28.76 | 29.14 |
| KRH47322 | Soybean | plastid | 29.41 | 28.85 |
| GSMUA_Achr2P05050_001 | Banana | plastid | 26.8 | 28.08 |
| Solyc06g068500.2.1 | Tomato | plastid | 29.41 | 27.78 |
| PGSC0003DMT400036852 | Potato | plastid | 29.41 | 27.78 |
| PGSC0003DMT400073306 | Potato | cytosol | 27.45 | 25.93 |
| Solyc03g117590.2.1 | Tomato | plastid | 26.8 | 25.47 |
| CDX67975 | Canola | plastid | 26.14 | 24.69 |
| Bra035143.1-P | Field mustard | plastid | 26.14 | 24.69 |
| Bra003592.1-P | Field mustard | plastid | 26.14 | 24.69 |
| KRH44579 | Soybean | plastid | 22.88 | 24.65 |
| AT1G80920.1 | Thale cress | plastid | 26.14 | 24.54 |
| CDX87353 | Canola | plastid | 25.49 | 24.07 |
| CDX79343 | Canola | plastid | 25.49 | 24.07 |
| CDX88567 | Canola | plastid | 25.49 | 24.07 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G495200.1 | EnsemblPlantsGene:TraesCS7D01G495200 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR24074 | PANTHER:PTHR24074:SF12 | PFAM:PF00226 | PFscan:PS50076 |
| PRINTS:PR00625 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 |
Description
No Description!
Coordinates
chr7D:-:602294534..602294995
Molecular Weight (calculated)
17472.5 Da
IEP (calculated)
10.275
GRAVY (calculated)
-0.861
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAAGGGVV LSLRGPSSSA WPAVGRRRRA SSSAAVRCGA TREKRPAATP GVALEEDHYR TLRLAPGATR GEVKKAFHRL ALQYHPDVVR QENSDRVDFQ
101: RINAAYRRVR SNMREAEARL EYWRRRYGLP DEDLDRYRRY LNDDGEDDWF PDL
101: RINAAYRRVR SNMREAEARL EYWRRRYGLP DEDLDRYRRY LNDDGEDDWF PDL
001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA
Arabidopsis Description
ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.