Factsheet for GSMUA_Achr1P10150_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P05050_001	Banana	plastid	59.85	56.16
GSMUA_Achr7P05310_001	Banana	mitochondrion	62.04	55.92
GSMUA_AchrUn_...	Banana	plastid	67.15	54.76
VIT_09s0018g00620.t01	Wine grape	plastid	57.66	51.97
KRH47322	Soybean	plastid	57.66	50.64
PGSC0003DMT400073306	Potato	cytosol	57.66	48.77
KRH44579	Soybean	plastid	50.37	48.59
Solyc03g117590.2.1	Tomato	plastid	56.93	48.45
PGSC0003DMT400036852	Potato	plastid	56.93	48.15
Solyc06g068500.2.1	Tomato	plastid	56.2	47.53
CDY22291	Canola	plastid	48.18	43.71
Bra008430.1-P	Field mustard	plastid	48.18	43.71
AT1G80920.1	Thale cress	plastid	50.37	42.33
CDX79343	Canola	plastid	49.63	41.98
CDX87353	Canola	plastid	49.63	41.98
Bra035143.1-P	Field mustard	plastid	49.63	41.98
CDX67975	Canola	plastid	48.18	40.74
CDX88567	Canola	plastid	48.18	40.74
Bra003592.1-P	Field mustard	plastid	48.18	40.74

Protein Annotations

EnsemblPlants:GSMUA_Achr1P10150_001	EnsemblPlants:GSMUA_Achr1T10150_001	EnsemblPlantsGene:GSMUA_Achr1G10150_001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR24074	PANTHER:PTHR24074:SF12	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002964587	UniProt:M0RYM4
MapMan:23.1.2.5	:	:	:	:	:

Description

Putative DnaJ protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G10150_001]

Coordinates

chr1:-:7678884..7680444

Molecular Weight (calculated)

15759.4 Da

IEP (calculated)

6.776

GRAVY (calculated)

-0.874

Length

137 amino acids

Sequence
(BLAST)

001: MGIYAGRSRV SRGRRSGGDV RCAASTGRLT EQYRTLRVQP GASEKEIKKA FRQLALQYHP DVCKGNNCSV QFHRINEAYD IVMSSLRGPQ LEEDRWNDDA
101: DETMRGMNDP SWDLWEEWMG WEGAGIRDYS SHINPYI

Best Arabidopsis Sequence Match ( AT1G80920.1 )
(BLAST)

001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA

Arabidopsis Description

ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.