Factsheet for GSMUA_AchrUn_randomP13100_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
extracellular 1
plastid 7
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P10150_001	Banana	mitochondrion	54.76	67.15
GSMUA_Achr7P05310_001	Banana	mitochondrion	57.14	63.16
VIT_09s0018g00620.t01	Wine grape	plastid	47.62	52.63
KRH47322	Soybean	plastid	48.21	51.92
GSMUA_Achr2P05050_001	Banana	plastid	44.64	51.37
PGSC0003DMT400073306	Potato	cytosol	47.62	49.38
KRH44579	Soybean	plastid	40.48	47.89
CDX87353	Canola	plastid	45.83	47.53
PGSC0003DMT400036852	Potato	plastid	45.83	47.53
Solyc03g117590.2.1	Tomato	plastid	45.24	47.2
CDY22291	Canola	plastid	42.26	47.02
Bra035143.1-P	Field mustard	plastid	45.24	46.91
CDX79343	Canola	plastid	45.24	46.91
CDX88567	Canola	plastid	45.24	46.91
Bra008430.1-P	Field mustard	plastid	41.67	46.36
AT1G80920.1	Thale cress	plastid	44.64	46.01
CDX67975	Canola	plastid	44.05	45.68
Bra003592.1-P	Field mustard	plastid	44.05	45.68
Solyc06g068500.2.1	Tomato	plastid	44.05	45.68

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP13100_001	EnsemblPlants:GSMUA_AchrUn_randomT13100_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG13100_001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR24074	PANTHER:PTHR24074:SF12	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000294B40C	UniProt:M0U8R9
MapMan:23.1.2.5	:	:	:	:	:

Description

Putative DnaJ protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13100_001]

Coordinates

chrchrUn_random:+:63238667..63240255

Molecular Weight (calculated)

18554.9 Da

IEP (calculated)

7.974

GRAVY (calculated)

-0.665

Length

168 amino acids

Sequence
(BLAST)

001: MAMSLVMMGS MGGASSSSSG RCAGRGEVLK GMRKGGRGGG NVRCAAAAAA AGSMADHYRM LRIHPGASEK EVKKAFRKLA LQYHPDVCKG SNCGVQFHRI
101: NEAYDIVMSS LRRAEEEQQQ WQPQGWSEDN DRNPMSGMYD PSWDLWEEWM GWEGAGTRDY SSHINPYI

Best Arabidopsis Sequence Match ( AT1G80920.1 )
(BLAST)

001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA

Arabidopsis Description

ATJ8Chaperone protein dnaJ 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.