Factsheet for GSMUA_Achr4P20520_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P16230_001	Banana	plastid	64.37	58.81
Os02t0792800-01	Rice	plastid	62.2	58.63
EES05942	Sorghum	plastid	62.01	58.55
Zm00001d018358_P001	Maize	plastid	62.01	58.55
TraesCS6B01G386400.1	Wheat	plastid	61.61	57.75
TraesCS6D01G336000.1	Wheat	golgi	61.22	57.38
TraesCS6A01G353700.1	Wheat	plastid	61.22	57.17
HORVU6Hr1G084510.1	Barley	plastid	60.83	54.31
GSMUA_Achr2P12380_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	20.87	24.26
GSMUA_Achr4P25150_001	Banana	nucleus	24.21	22.24
GSMUA_Achr6P25590_001	Banana	plastid	17.91	16.58
GSMUA_Achr6P18880_001	Banana	mitochondrion, plastid	17.32	16.3

Protein Annotations

Gene3D:2.102.10.10	MapMan:23.1.3.5.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0010277	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0051537	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G20520_001	EnsemblPlants:GSMUA_Achr4P20520_001	EnsemblPlants:GSMUA_Achr4T20520_001	InterPro:IPR017941
InterPro:IPR036922	UniProt:M0SQL5	PFAM:PF00355	PFAM:PF08417	PFscan:PS51296	PANTHER:PTHR21266
PANTHER:PTHR21266:SF29	InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022	SUPFAM:SSF55961
TMHMM:TMhelix	UniParc:UPI000296096E	SEG:seg	:	:	:

Description

Putative Pheophorbide a oxygenase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G20520_001]

Coordinates

chr4:+:21127962..21130937

Molecular Weight (calculated)

57653.1 Da

IEP (calculated)

8.849

GRAVY (calculated)

-0.325

Length

508 amino acids

Sequence
(BLAST)

001: MALPSCLPSL QKPSPCVSSA FLRRPLLVAS TKGKPGAATS GQRWRRGTGS VAAGPMSTEE VLLRPEEEEV KEEYDWREEW YPLYLTAEVP EDAPLAHTVF
101: DEKIVLFRDG NGVIRCFQDR CPHRLAKLSE GQLVDGRLEC LYHGWQFGDD GKCLKIPQLP DGARIPRSAC VRTYETRDSQ GVVWVWMSDK NPPDENKLPW
201: FEHYARPGFQ DVSTIHELPY DHSILLENFM DPAHVPISHD RTDFYSKRED AQALLFEVTK RSGRGFAGSW SKSKPPALTN LLSFEAPCIL QNSNEYIDKD
301: GTKQYVSALF LCRPTGQGKS MVIIRFGSTL RSPIVRLLPT WFFHQNICKV LEQDMGFLSS QNEILWKEKA PTGRLYINLK SCDTWVAEYR RWKDKVGHGM
401: PYFFAGISSS MPAKGATGDI HAPNPINRYF RHIVHCKECR SAVKSFQVWR NAFVFMAFTS ISMAILASRR QWKAFFLVSA AFCLAGAHAC SSALSLIKTN
501: FIRGHRRL

Best Arabidopsis Sequence Match ( AT2G24820.1 )
(BLAST)

001: MAVPFLSSSL QLTPTSPILF TKVTPTPIIH NHRSTCTIPT KPRLRLLRRS AVAGTAVSDQ TEGGGDVLLN PEEEKRVEVA DYDWTEEWYP LYLTKNVPED
101: APLGLTVYDR QIVLYKDGEG TLRCYEDRCP HRLAKLSEGQ LIDGRLECLY HGWQFEGEGK CVKIPQLPAS AKIPKAACVK TYEVKDSQGV VWVWMSTKTP
201: PNPEKLPWFE NFARPGFFDI STTHELPYDH SILLENLMDP AHVPISHDRT DFTAKREDAQ PLVFEVTERS NRGFAGTWGR EKEGGKGSNL LRFDAPCVLQ
301: NNREFEGKDG VKNYFSGLFL CRPTGQGKSM LIVRFGVTKR SPLVSVLPQW FWHQNACKVF EQDMGFLSSQ NEVLMKEKVP TKDLYLNLKS SDTWVAEYRK
401: WMDKVGHGMP YHFGHRTISL PKVPPVVEHA PAGLIAALSA SYPAKGGIGT MHAPNLANRY FRHIIHCRSC SNVIKSFELW KNILSATAVA LTALAILVVS
501: RQWKAVLLGS AALCSAAAYT CLRAINLNTN NFIRTHRRL

Arabidopsis Description

TIC55Protein TIC 55, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SK50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.