Factsheet for GSMUA_Achr7P16230_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
peroxisome 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g07020.t01	Wine grape	plastid	65.65	67.1
KRH52304	Soybean	plastid	64.03	65.93
AT2G24820.1	Thale cress	plastid	62.77	64.75
GSMUA_Achr4P20520_001	Banana	plastid	58.81	64.37
Bra000547.1-P	Field mustard	plastid	62.23	63.96
CDX83228	Canola	plastid	62.23	63.96
CDY38513	Canola	plastid	62.23	63.96
CDY38515	Canola	plastid	62.23	63.96
KRH61640	Soybean	plasma membrane, plastid	65.83	63.65
PGSC0003DMT400075266	Potato	plastid	59.71	60.47
Solyc12g096550.1.1	Tomato	plastid	59.35	60.44
CDY38514	Canola	plastid	23.38	55.32
GSMUA_Achr2P12380_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	21.4	27.23
GSMUA_Achr4P25150_001	Banana	nucleus	22.84	22.97
GSMUA_Achr6P18880_001	Banana	mitochondrion, plastid	15.29	15.74
GSMUA_Achr6P25590_001	Banana	plastid	15.29	15.48

Protein Annotations

Gene3D:2.102.10.10	MapMan:23.1.3.5.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009941	GO:GO:0010277	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0045036	GO:GO:0051537	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G16230_001	EnsemblPlants:GSMUA_Achr7P16230_001
EnsemblPlants:GSMUA_Achr7T16230_001	InterPro:IPR017941	InterPro:IPR036922	UniProt:M0TI10	PFAM:PF00355	PFAM:PF08417
PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF29	InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf
SUPFAM:SSF50022	SUPFAM:SSF55961	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000294D4F4	SEG:seg

Description

Putative Pheophorbide a oxygenase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G16230_001]

Coordinates

chr7:-:13460244..13462350

Molecular Weight (calculated)

62111.3 Da

IEP (calculated)

8.375

GRAVY (calculated)

-0.209

Length

556 amino acids

Sequence
(BLAST)

001: MALFRLSSLC LLSVHKALET SSAALPCSPI PTSPAPTTNT TATGFNTSCI GGRRRRRWAL VSKSGRGVRT VECRAAVVED VDEEVLVPAE AEAEEAAEEY
101: DWRQEWYPLY LTAQVPDDAP LGLTVFDKQV VLYRDGAGVL RCYEDRCPHR LAKLSEGQLV EGRLECLYHG WQFEGEGKCV KIPQLQEGGK IPRAACVRTY
201: EVRNSQGVVW VWMSEKNPPN DEKLPWFEHY AKPGFQDTST IHELPYDHSI LLENLMDPAH VPISHDRTDW TAKREDAQPL VFTVTERSSR GFAGHWGRSK
301: NPALMNFLRF QAPCVLSNDL EFVDKAGVKQ YFSALFLCRP TGQGKSMLIV RFGASSRSPV FNLVPEWYFH QNACKVFEQD MGFLSSQNEV LVKERVPTKE
401: LYLNLRSSDT WVAEYRKWMD KVGHGMPYYF GHSSLSPPKQ PAVVEQAPVG LVAGISASFP AKGGVGTQHA PNPANRYYRH VVHCKGCRSV VKTFQAWKQT
501: LVLLSLAAVA SAILASAQQW KVVLLASAAL FLAGSSVCSF VVSLITTNFI RTHRRL

Best Arabidopsis Sequence Match ( AT2G24820.1 )
(BLAST)

001: MAVPFLSSSL QLTPTSPILF TKVTPTPIIH NHRSTCTIPT KPRLRLLRRS AVAGTAVSDQ TEGGGDVLLN PEEEKRVEVA DYDWTEEWYP LYLTKNVPED
101: APLGLTVYDR QIVLYKDGEG TLRCYEDRCP HRLAKLSEGQ LIDGRLECLY HGWQFEGEGK CVKIPQLPAS AKIPKAACVK TYEVKDSQGV VWVWMSTKTP
201: PNPEKLPWFE NFARPGFFDI STTHELPYDH SILLENLMDP AHVPISHDRT DFTAKREDAQ PLVFEVTERS NRGFAGTWGR EKEGGKGSNL LRFDAPCVLQ
301: NNREFEGKDG VKNYFSGLFL CRPTGQGKSM LIVRFGVTKR SPLVSVLPQW FWHQNACKVF EQDMGFLSSQ NEVLMKEKVP TKDLYLNLKS SDTWVAEYRK
401: WMDKVGHGMP YHFGHRTISL PKVPPVVEHA PAGLIAALSA SYPAKGGIGT MHAPNLANRY FRHIIHCRSC SNVIKSFELW KNILSATAVA LTALAILVVS
501: RQWKAVLLGS AALCSAAAYT CLRAINLNTN NFIRTHRRL

Arabidopsis Description

TIC55Protein TIC 55, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SK50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.