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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0146400-01 Rice plastid 71.25 74.48
EER95507 Sorghum plastid 70.16 74.05
Zm00001d027656_P001 Maize plastid 69.44 73.85
HORVU4Hr1G079260.2 Barley peroxisome 65.28 73.23
TraesCS4B01G311100.1 Wheat golgi 68.72 72.66
TraesCS4A01G411000.1 Wheat plastid 69.26 71.72
TraesCS4D01G309000.1 Wheat mitochondrion 67.63 70.57
HORVU4Hr1G079330.1 Barley plastid 67.99 70.15
VIT_06s0061g00790.t01 Wine grape plastid 67.27 69.02
KRH30552 Soybean plastid 66.18 67.16
Solyc11g066440.1.1 Tomato plastid 63.83 65.74
KRH25120 Soybean plastid 66.0 64.83
AT3G44880.1 Thale cress plastid 62.75 64.62
CDY29727 Canola plastid 62.21 64.42
PGSC0003DMT400001216 Potato plastid 63.83 64.3
Bra037607.1-P Field mustard plastid 62.21 64.18
CDY20340 Canola plastid 63.11 61.01
GSMUA_Achr2P12380_001 Banana cytosol, mitochondrion, peroxisome, plasma membrane 26.58 33.64
GSMUA_Achr4P20520_001 Banana plastid 22.24 24.21
GSMUA_Achr7P16230_001 Banana plastid 22.97 22.84
GSMUA_Achr6P18880_001 Banana mitochondrion, plastid 14.47 14.81
GSMUA_Achr6P25590_001 Banana plastid 14.1 14.21
Protein Annotations
MapMan:13.1.1.2.8Gene3D:2.102.10.10Gene3D:3.30.170.10MapMan:7.12.6.7.5InterPro:Cyclin-dep_kinase_reg-subInterPro:Cyclin-dep_kinase_reg-sub_sf
GO:GO:0000003GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006464GO:GO:0006950GO:GO:0007049GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0008219GO:GO:0009056GO:GO:0009507GO:GO:0009534
GO:GO:0009536GO:GO:0009579GO:GO:0009605GO:GO:0009607GO:GO:0009791GO:GO:0009816
GO:GO:0009908GO:GO:0009941GO:GO:0009987GO:GO:0010154GO:GO:0010277GO:GO:0015996
GO:GO:0016491GO:GO:0016538GO:GO:0019538GO:GO:0030234GO:GO:0032441GO:GO:0045859
GO:GO:0051301GO:GO:0051537GO:GO:0055114EnsemblPlantsGene:GSMUA_Achr4G25150_001EnsemblPlants:GSMUA_Achr4P25150_001EnsemblPlants:GSMUA_Achr4T25150_001
InterPro:IPR017941InterPro:IPR036858InterPro:IPR036922UniProt:M0SRX6PFAM:PF00355PFAM:PF01111
PFAM:PF08417PRINTS:PR00296ScanProsite:PS00944PFscan:PS51296PANTHER:PTHR21266PANTHER:PTHR21266:SF24
InterPro:PaOInterPro:Rieske_2Fe-2SInterPro:Rieske_2Fe-2S_sfSMART:SM01084SUPFAM:SSF50022SUPFAM:SSF55637
SUPFAM:SSF55961UniParc:UPI0002948F5CSEG:seg:::
Description
Pheophorbide a oxygenase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G25150_001]
Coordinates
chr4:+:24736532..24744045
Molecular Weight (calculated)
63085.7 Da
IEP (calculated)
7.216
GRAVY (calculated)
-0.393
Length
553 amino acids
Sequence
(BLAST)
001: MGQIQYSEKY FDDTYEYRHV VLPPEVAKLL PKNRLLSENE WRAIGVQQSR GWVHYAIHRP EPHIMLFRRP LNYQQQQVNH AAASQEAEEA SSSSPSESSF
101: SWRDHWYPVS LIEDLDPRVP TPFQLLNRDL VLWKDPNSGD WVALDDRCPH RLAPLSEGRI DETGCLQCSY HGWSFDGSGS CVRIPQASSE GPEARAVRSP
201: RSCAVKFPTL VSQGMLFVWP DENGWEKAAA TNPPMLPAEF DDPNFSTVTI QRDLFYGYDT LMENVSDPSH IDFAHHKVTG RRDRARPLPF KLESSGAWGY
301: AGSDAGNPRI SAKFVAPCYV MNKIEIDTKL PFLGDQKWII WICSFNIPMA PGKTRSIVCS ARNFFQFSMP GPSWWQLVPR WYEHWTSNKV YDGDMIVLQG
401: QEKIFLSKMM ESSTDVNQQY TKITFTPTQA DRLVLAFRNW LRRYGNGQPN WFGHASHQPL PSTVLSKRQM LDRYEQHTLK CSSCKGAYEA FQMLQKLFIG
501: TTIVFCATAG IPSEFSIRLL LAAAAIASAA VAYALRELQK NFVYVDYIHA NID
Best Arabidopsis Sequence Match ( AT3G44880.1 )
(BLAST)
001: MSVVLLSSTS ATITKSQSKK IPFLSPTTKF PLKVSISPSR SKLFHNPLRV AAPPSVPTSD STEEKRIEEE YGGDKEEEGS EFKWRDHWYP VSLVEDLDPN
101: VPTPFQLLGR DLVLWFDRND QKWAAFDDLC PHRLAPLSEG RLDENGHLQC SYHGWSFGGC GSCTRIPQAA TSGPEARAVK SPRACAIKFP TMVSQGLLFV
201: WPDENGWDRA NSIEPPRLPD DFDKPEFSTV TIQRDLFYGY DTLMENVSDP SHIDFAHHKV TGRRDRAKPL PFKVESSGPW GFQGANDDSP RITAKFVAPC
301: YSMNKIELDA KLPIVGNQKW VIWICSFNIP MAPGKTRSIV CSARNFFQFS VPGPAWWQVV PRWYEHWTSN LVYDGDMIVL QGQEKVFLAK SMESPDYDVN
401: KQYTKLTFTP TQADRFVLAF RNWLRRHGKS QPEWFGSTPS NQPLPSTVLT KRQMLDRFDQ HTQVCSSCKG AYNSFQILKK FLVGATVFWA ATAGVPSDVQ
501: IRLVLAGLSL ISAASAYALH EQEKNFVFRD YVHSEIE
Arabidopsis Description
PAOPheophorbide a oxygenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.