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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037607.1-P Field mustard plastid 99.44 99.07
CDY20340 Canola plastid 98.88 92.31
AT3G44880.1 Thale cress plastid 92.51 91.99
Solyc11g066440.1.1 Tomato plastid 71.54 71.14
VIT_06s0061g00790.t01 Wine grape plastid 70.04 69.39
TraesCS4B01G311100.1 Wheat golgi 67.6 69.02
HORVU4Hr1G079260.2 Barley peroxisome 63.48 68.76
PGSC0003DMT400001216 Potato plastid 70.6 68.67
TraesCS4A01G411000.1 Wheat plastid 68.54 68.54
TraesCS4D01G309000.1 Wheat mitochondrion 67.42 67.92
KRH30552 Soybean plastid 69.29 67.89
Zm00001d027656_P001 Maize plastid 66.1 67.88
Os03t0146400-01 Rice plastid 67.23 67.86
EER95507 Sorghum plastid 66.48 67.75
HORVU4Hr1G079330.1 Barley plastid 67.6 67.35
KRH25120 Soybean plastid 69.48 65.9
GSMUA_Achr4P25150_001 Banana nucleus 64.42 62.21
CDX89405 Canola plastid 28.28 28.28
CDX94430 Canola plastid 28.28 28.22
CDY38514 Canola plastid 11.61 26.38
CDY38515 Canola plastid 25.84 25.51
CDY38513 Canola plastid 25.84 25.51
CDX83228 Canola plastid 25.84 25.51
CDY36339 Canola plastid 14.79 15.08
CDY63862 Canola plastid 14.61 14.69
CDY14980 Canola plastid 14.61 14.61
Protein Annotations
Gene3D:2.102.10.10MapMan:7.12.6.7.5GO:A0A078GX05UniProt:A0A078GX05EnsemblPlants:CDY29727ProteinID:CDY29727
ProteinID:CDY29727.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152
GO:GO:0010277GO:GO:0016491GO:GO:0051537GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00043538001InterPro:IPR017941
InterPro:IPR036922PFAM:PF00355PFAM:PF08417PFscan:PS51296PANTHER:PTHR21266PANTHER:PTHR21266:SF24
InterPro:PaOInterPro:Rieske_2Fe-2SInterPro:Rieske_2Fe-2S_sfSUPFAM:SSF50022SUPFAM:SSF55961UniParc:UPI0004EE2E67
SEG:seg:::::
Description
BnaAnng03490DBnaAnng03490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GX05]
Coordinates
chrLK032242:+:199316..201835
Molecular Weight (calculated)
60179.3 Da
IEP (calculated)
8.103
GRAVY (calculated)
-0.365
Length
534 amino acids
Sequence
(BLAST)
001: MSVVLVSSAS ATLTKSKSIK IPFLSPNSAK FPSRVSISPQ RRKLLDSPLR VAAPPSVPTS DPAEESRIEE EHGEEGSEFK WRDHWYPVSL VEDLDPNSPT
101: RFQLLGRNLV LWFDRNDQKW AAFDDLCPHR LAPLSEGRLD ENGHLQCSYH GWSFAGCGSC TKIPQAATSG PEARAVKSPR ACAIKFPTMV SQGLLFVWPD
201: ENGWDRANSI QPPRLPDDFD KPEFSTVTIQ RDLFYGYDTL MENVSDPSHI DFAHHKVTGR RDRAKPLPFK VESSGPWGFQ GANDDSPKIT AKFVAPCYSL
301: NKIEIDAKLP IVGNQKWVIW ICSFNIPMAP GKTRSIVCSA RNFFQFSVPG PAWWQVVPRW YEHWTSNLVY DGDMIVLQGQ EKVFLSKSME SPDYDVNKQY
401: TKLTFTPTQA DRFVLAFRNW LRRYGKSQPE WFGSTAANQP LPSTVLTKRE MLDRFEQHTQ VCSSCKGAYN GFQIVKKFLV GTTVFLAATA GVPSDVQIRL
501: VLAGLALISA ASAYALHEKE KNFVFRDYVH SEIE
Best Arabidopsis Sequence Match ( AT3G44880.1 )
(BLAST)
001: MSVVLLSSTS ATITKSQSKK IPFLSPTTKF PLKVSISPSR SKLFHNPLRV AAPPSVPTSD STEEKRIEEE YGGDKEEEGS EFKWRDHWYP VSLVEDLDPN
101: VPTPFQLLGR DLVLWFDRND QKWAAFDDLC PHRLAPLSEG RLDENGHLQC SYHGWSFGGC GSCTRIPQAA TSGPEARAVK SPRACAIKFP TMVSQGLLFV
201: WPDENGWDRA NSIEPPRLPD DFDKPEFSTV TIQRDLFYGY DTLMENVSDP SHIDFAHHKV TGRRDRAKPL PFKVESSGPW GFQGANDDSP RITAKFVAPC
301: YSMNKIELDA KLPIVGNQKW VIWICSFNIP MAPGKTRSIV CSARNFFQFS VPGPAWWQVV PRWYEHWTSN LVYDGDMIVL QGQEKVFLAK SMESPDYDVN
401: KQYTKLTFTP TQADRFVLAF RNWLRRHGKS QPEWFGSTPS NQPLPSTVLT KRQMLDRFDQ HTQVCSSCKG AYNSFQILKK FLVGATVFWA ATAGVPSDVQ
501: IRLVLAGLSL ISAASAYALH EQEKNFVFRD YVHSEIE
Arabidopsis Description
PAOPheophorbide a oxygenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.