Factsheet for Bra037607.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29727	Canola	plastid	99.07	99.44
AT3G44880.1	Thale cress	plastid	91.98	91.81
Solyc11g066440.1.1	Tomato	plastid	71.27	71.14
VIT_06s0061g00790.t01	Wine grape	plastid	69.96	69.57
TraesCS4B01G311100.1	Wheat	golgi	67.35	69.02
PGSC0003DMT400001216	Potato	plastid	70.52	68.85
HORVU4Hr1G079260.2	Barley	peroxisome	63.25	68.76
TraesCS4A01G411000.1	Wheat	plastid	68.28	68.54
TraesCS4D01G309000.1	Wheat	mitochondrion	67.16	67.92
Zm00001d027656_P001	Maize	plastid	65.86	67.88
Os03t0146400-01	Rice	plastid	66.98	67.86
EER95507	Sorghum	plastid	66.23	67.75
KRH30552	Soybean	plastid	68.84	67.71
HORVU4Hr1G079330.1	Barley	plastid	67.35	67.35
KRH25120	Soybean	plastid	69.22	65.9
GSMUA_Achr4P25150_001	Banana	nucleus	64.18	62.21
Bra013907.1-P	Field mustard	plastid	28.54	28.65
Bra000547.1-P	Field mustard	plastid	25.75	25.51
Bra036948.1-P	Field mustard	plastid	14.55	14.61

Protein Annotations

Gene3D:2.102.10.10	MapMan:7.12.6.7.5	EnsemblPlantsGene:Bra037607	EnsemblPlants:Bra037607.1	EnsemblPlants:Bra037607.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219
GO:GO:0009056	GO:GO:0009507	GO:GO:0009534	GO:GO:0009536	GO:GO:0009579	GO:GO:0009605
GO:GO:0009607	GO:GO:0009791	GO:GO:0009816	GO:GO:0009908	GO:GO:0009941	GO:GO:0009987
GO:GO:0010154	GO:GO:0010277	GO:GO:0015996	GO:GO:0016491	GO:GO:0032441	GO:GO:0051537
GO:GO:0055114	InterPro:IPR017941	InterPro:IPR036922	UniProt:M4F944	PFAM:PF00355	PFAM:PF08417
PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF24	InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf
SUPFAM:SSF50022	SUPFAM:SSF55961	UniParc:UPI00025437B9	SEG:seg	:	:

Description

AT3G44880 (E=5e-276) ACD1, LLS1, PAO | ACD1 (ACCELERATED CELL DEATH 1); iron-sulfur cluster binding / pheophorbide a oxygenase

Coordinates

chrA01:+:13203113..13205395

Molecular Weight (calculated)

60310.4 Da

IEP (calculated)

7.932

GRAVY (calculated)

-0.362

Length

536 amino acids

Sequence
(BLAST)

001: MSVVLVSSAS ATLTKSKSIK IPFLSPNSSA KFPSRVSISP QRRKLLDSPL RVAAPPSVPT SDPAEESSRI EEEHGEEGSE FKWRDHWYPV SLVEDLDPNS
101: PTRFQLLGRD LVLWFDRNDQ KWAAFDDLCP HRLAPLSEGR LDENGHLQCS YHGWSFAGCG SCTKIPQAAT SGPEARAVKS PRACAIKFPA MVSQGLLFVW
201: PDENGWDRAN SVQPPRLPDD FDKPEFSTVT IQRDLFYGYD TLMENVSDPS HIDFAHHKVT GRRDRAKPLP FKVESSGPWG FQGANDDSPK ITAKFVAPCY
301: SLNKIEIDAK LPIVGNQKWV IWICSFNIPM APGKTRSIVC SARNFFQFSV PGPAWWQVVP RWYEHWTSNL VYDGDMIVLQ GQEKVFLSKS MESPDYDVNK
401: QYTKLTFTPT QADRFVLAFR NWLRRYGKSQ PEWFGSTAAN QPLPSTVLTK REMLDRFEQH TQVCSSCKGA YNGFQIVKKF LVGTTVFLAA TAGVPSDVQI
501: RLVLAGLALI SAASAYALHE KEKNFVFRDY VHSEIE

Best Arabidopsis Sequence Match ( AT3G44880.1 )
(BLAST)

001: MSVVLLSSTS ATITKSQSKK IPFLSPTTKF PLKVSISPSR SKLFHNPLRV AAPPSVPTSD STEEKRIEEE YGGDKEEEGS EFKWRDHWYP VSLVEDLDPN
101: VPTPFQLLGR DLVLWFDRND QKWAAFDDLC PHRLAPLSEG RLDENGHLQC SYHGWSFGGC GSCTRIPQAA TSGPEARAVK SPRACAIKFP TMVSQGLLFV
201: WPDENGWDRA NSIEPPRLPD DFDKPEFSTV TIQRDLFYGY DTLMENVSDP SHIDFAHHKV TGRRDRAKPL PFKVESSGPW GFQGANDDSP RITAKFVAPC
301: YSMNKIELDA KLPIVGNQKW VIWICSFNIP MAPGKTRSIV CSARNFFQFS VPGPAWWQVV PRWYEHWTSN LVYDGDMIVL QGQEKVFLAK SMESPDYDVN
401: KQYTKLTFTP TQADRFVLAF RNWLRRHGKS QPEWFGSTPS NQPLPSTVLT KRQMLDRFDQ HTQVCSSCKG AYNSFQILKK FLVGATVFWA ATAGVPSDVQ
501: IRLVLAGLSL ISAASAYALH EQEKNFVFRD YVHSEIE

Arabidopsis Description

PAOPheophorbide a oxygenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.