Factsheet for Os03t0146400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95507	Sorghum	plastid	87.33	88.17
Zm00001d027656_P001	Maize	plastid	86.58	88.08
TraesCS4B01G311100.1	Wheat	golgi	84.69	85.66
TraesCS4A01G411000.1	Wheat	plastid	86.01	85.21
TraesCS4D01G309000.1	Wheat	mitochondrion	85.26	85.09
HORVU4Hr1G079330.1	Barley	plastid	85.07	83.96
HORVU4Hr1G079260.2	Barley	peroxisome	76.37	81.95
GSMUA_Achr4P25150_001	Banana	nucleus	74.48	71.25
VIT_06s0061g00790.t01	Wine grape	plastid	72.02	70.69
KRH30552	Soybean	plastid	71.27	69.17
CDY29727	Canola	plastid	67.86	67.23
Solyc11g066440.1.1	Tomato	plastid	68.24	67.23
Bra037607.1-P	Field mustard	plastid	67.86	66.98
AT3G44880.1	Thale cress	plastid	67.86	66.85
KRH25120	Soybean	plastid	70.7	66.43
PGSC0003DMT400001216	Potato	plastid	67.86	65.39
CDY20340	Canola	plastid	68.05	62.94
Os03t0805900-00	Rice	plastid	17.01	32.14
Os03t0805700-00	Rice	mitochondrion	28.92	28.76
Os03t0805600-00	Rice	extracellular, mitochondrion	10.59	27.32
Os02t0792800-01	Rice	plastid	24.76	24.3
Os03t0806300-00	Rice	peroxisome	26.09	24.04
Os10t0567400-01	Rice	mitochondrion	15.31	14.97
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	15.12	14.76

Protein Annotations

Gene3D:2.102.10.10	MapMan:7.12.6.7.5	ProteinID:BAF10872.1	ProteinID:BAS82280.1	GO:GO:0000003	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009056
GO:GO:0009507	GO:GO:0009534	GO:GO:0009536	GO:GO:0009579	GO:GO:0009605	GO:GO:0009607
GO:GO:0009791	GO:GO:0009816	GO:GO:0009908	GO:GO:0009941	GO:GO:0009987	GO:GO:0010154
GO:GO:0010277	GO:GO:0015996	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0032441
GO:GO:0051537	GO:GO:0055114	InterPro:IPR017941	InterPro:IPR036922	EnsemblPlantsGene:Os03g0146400	EnsemblPlants:Os03t0146400-01
PFAM:PF00355	PFAM:PF08417	PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF24	InterPro:PaO
UniProt:Q0DV66	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022	SUPFAM:SSF55961	TMHMM:TMhelix
UniParc:UPI0000E11F17	SEG:seg	:	:	:	:

Description

Pheophorbide a oxygenasePheophorbide a oxygenase, Leaf senescence, Wound responses (Os03t0146400-01);Similar to Lethal leaf-spot 1 (Fragment). (Os03t0146400-02)

Coordinates

chr3:+:2576609..2580404

Molecular Weight (calculated)

59077.3 Da

IEP (calculated)

8.046

GRAVY (calculated)

-0.261

Length

529 amino acids

Sequence
(BLAST)

001: MPVMAPTASL LLSPRPLPAS RRVPSLPALS ASGRLRLRRA RADTRLRVAA PPSVPGEADQ APGETEPSTS SADEKFVWRD HWYPVSLVED LDPSVPTPFQ
101: LLNRDLVIWK DPKSGEWVAL DDRCPHRLAP LSEGRIDETG CLQCSYHGWS FDGSGACTRI PQAAPEGPEA KAVRSPKACA IKFPTLVSQG LLFVWPDENG
201: WEKATATKPP MLPKEFEDPA FSTVTIQRDL YYGYDTLMEN VSDPSHIEFA HHKVTGRRDR ARPLPFKMES SGAWGYSGSN SGNPRISATF VAPCYALNKI
301: EIDTKLPIFG DQKWVIWICS FNIPMAPGKT RSIVCSARNF FQFSMPGKAW WQLVPRWYEH WTSNLVYDGD MIVLQGQEKI FLSASKESSA DINQQYTKIT
401: FTPTQADRFV LAFRAWLRKF GNSQPDWFGN PSQEVLPSTV LSKREMLDRY EQHTLKCSSC KGAYNAFQTL QKVFMGATVA FCATAGIPAD VQFRLLLAAA
501: ALVSAAVAYA FYTLQKNFVF VDYVHAEID

Best Arabidopsis Sequence Match ( AT3G44880.1 )
(BLAST)

001: MSVVLLSSTS ATITKSQSKK IPFLSPTTKF PLKVSISPSR SKLFHNPLRV AAPPSVPTSD STEEKRIEEE YGGDKEEEGS EFKWRDHWYP VSLVEDLDPN
101: VPTPFQLLGR DLVLWFDRND QKWAAFDDLC PHRLAPLSEG RLDENGHLQC SYHGWSFGGC GSCTRIPQAA TSGPEARAVK SPRACAIKFP TMVSQGLLFV
201: WPDENGWDRA NSIEPPRLPD DFDKPEFSTV TIQRDLFYGY DTLMENVSDP SHIDFAHHKV TGRRDRAKPL PFKVESSGPW GFQGANDDSP RITAKFVAPC
301: YSMNKIELDA KLPIVGNQKW VIWICSFNIP MAPGKTRSIV CSARNFFQFS VPGPAWWQVV PRWYEHWTSN LVYDGDMIVL QGQEKVFLAK SMESPDYDVN
401: KQYTKLTFTP TQADRFVLAF RNWLRRHGKS QPEWFGSTPS NQPLPSTVLT KRQMLDRFDQ HTQVCSSCKG AYNSFQILKK FLVGATVFWA ATAGVPSDVQ
501: IRLVLAGLSL ISAASAYALH EQEKNFVFRD YVHSEIE

Arabidopsis Description

PAOPheophorbide a oxygenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.