Factsheet for Os03t0805700-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0805900-00	Rice	plastid	36.65	69.64
TraesCS5B01G465000.1	Wheat	golgi	69.36	69.49
TraesCS5A01G456000.1	Wheat	plasma membrane, plastid	69.36	69.49
TraesCS5D01G466800.3	Wheat	mitochondrion, plasma membrane, plastid	69.17	69.04
Os03t0805600-00	Rice	extracellular, mitochondrion	26.32	68.29
Zm00001d034523_P001	Maize	plastid	66.73	67.62
TraesCS5B01G464800.1	Wheat	cytosol	36.84	67.59
Zm00001d002582_P001	Maize	peroxisome	27.07	67.29
EER93253	Sorghum	plastid	65.04	65.9
TraesCS5A01G455800.1	Wheat	plastid	67.48	65.75
TraesCS5D01G466600.1	Wheat	mitochondrion, plasma membrane, plastid	62.97	65.43
HORVU5Hr1G109470.1	Barley	plastid	68.23	64.02
TraesCS7B01G038300.1	Wheat	golgi	61.84	63.03
TraesCS7D01G137200.1	Wheat	golgi	60.9	62.07
KXG37317	Sorghum	plastid	61.09	61.67
Solyc04g039870.1.1	Tomato	cytosol, peroxisome, plastid	15.04	59.7
TraesCS7B01G038100.1	Wheat	mitochondrion	54.89	59.47
HORVU7Hr1G028370.3	Barley	mitochondrion, peroxisome, plasma membrane	61.09	58.35
TraesCS7A01G137000.1	Wheat	plastid	60.9	56.74
Os03t0806300-00	Rice	peroxisome	59.02	54.7
PGSC0003DMT400007678	Potato	cytosol, peroxisome, plasma membrane	23.31	53.68
VIT_06s0004g00620.t01	Wine grape	cytosol, peroxisome, plasma membrane	44.17	50.76
GSMUA_Achr2P12380_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	40.98	49.89
VIT_06s0004g00610.t01	Wine grape	cytosol, plastid	47.56	48.37
KRH58922	Soybean	plastid	46.8	47.07
KRH42828	Soybean	plastid	46.43	46.52
CDX89405	Canola	plastid	46.24	46.07
Bra013907.1-P	Field mustard	plastid	46.24	46.07
CDX94430	Canola	plastid	46.05	45.79
KRH42827	Soybean	mitochondrion	12.03	44.44
AT4G25650.2	Thale cress	plastid	45.86	43.65
VIT_06s0004g00660.t01	Wine grape	cytosol	6.39	43.04
PGSC0003DMT400027602	Potato	plastid	43.8	42.91
Solyc04g040160.2.1	Tomato	plastid	43.23	42.28
Zm00001d035045_P001	Maize	plastid	12.22	42.21
VIT_06s0004g00630.t01	Wine grape	cytosol	8.27	39.64
Zm00001d011533_P001	Maize	plastid	23.87	31.59
Os03t0146400-01	Rice	plastid	28.76	28.92
Os02t0792800-01	Rice	plastid	24.06	23.75
KRH05339	Soybean	cytosol	6.02	23.19
Os10t0567400-01	Rice	mitochondrion	16.17	15.9
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	15.23	14.94

Protein Annotations

Gene3D:2.102.10.10	Gene3D:3.30.530.90	MapMan:35.1	UniProt:A0A0P0W530	ProteinID:BAS86941.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010277	GO:GO:0016491
GO:GO:0051537	GO:GO:0055114	InterPro:IPR017941	InterPro:IPR036922	EnsemblPlantsGene:Os03g0805700	EnsemblPlants:Os03t0805700-00
PFAM:PF00355	PFAM:PF08417	PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF38	InterPro:PaO
InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022	SUPFAM:SSF55961	UniParc:UPI00039398F7	SEG:seg

Description

Similar to Pheophorbide a oxygenase. (Os03t0805700-00)

Coordinates

chr3:+:33645107..33647519

Molecular Weight (calculated)

59810.6 Da

IEP (calculated)

7.844

GRAVY (calculated)

-0.212

Length

532 amino acids

Sequence
(BLAST)

001: MAPLSLLLRS GARPASLPLR VDGAASQRIA SLAAPPRRPW IGRGVALRLP TSVSAVSAAE TETETPPVAE EVRAPAAGEE RFDWLDQWYP VAPVCDLDPR
101: KPHGKMVLGL RVVAWFDGGG EWRVVDDACP HRLAPLSEGR VDGKGRLQCA YHGWCFDGHG SCQFIPQAPA LGPPVHKNSK ACVASYPSVV QNNILWFYPR
201: TEPEYRDVLQ RKRPPYFPDL DDPSFNTVFG VRDFPYGYDM LVENLMDPAH VPYAHKGLFP QFQDKEDPGR VEFDQERGGP VKMKIEEANI DGFLSIQGEN
301: WGHFRFIAPC TINRSDFDQE KQQQQPQGML VFLCIPVAPG RSRVIWVFPQ SVSAWPDKFI PRWLHHMVTN TVLDSDLYLL HIEERNFAAV GVDKWQKACY
401: VPTLSDNMII TFRNWFRKYC KHQVGWATPM VNQLPTTPTK DQLMERYWSH VMQCTSCSAA LKWMRAMEVA LQVASVAVVG FLAAGKGTTV VTSAVQRAAV
501: VAAAALCFAA SRWLANFIEK SFYFQDYVHA YK

Best Arabidopsis Sequence Match ( AT4G25650.1 )
(BLAST)

001: MEAALAACAL PSLRILNTKP RFRCSFSNPS LPISPNSLIT RKSSRFTTAV SSPPSSSAAT STNSPPEPEA LFEPGSDKFD WYANWYPVMP ICDLDKKVPH
101: GKKVMGIDLV VWWDRNEKQW KVMDDTCPHR LAPLSDGRID QWGRLQCVYH GWCFNGSGDC KLIPQAPPDG PPVHTFKQAC VAVYPSTVQH EIIWFWPNSD
201: PKYKNIIETN KPPYIPELED PSFTKLMGNR DIPYGYDVLV ENLMDPAHVP YAHYGLMRFP KPKEKIDREG GKPLEINVKK LDNKGFFSKQ EWGYSNFIAP
301: CVYRSSTDPL PEQEHEYPAP AASDKAALSK RRLSLIFICI PVSPGRSRLI WTFPRNFGVF IDKIVPRWVF HIGQNTILDS DLHLLHVEER KILERGPENW
401: QKACFIPTKS DANVVTFRRW FNKYSEARVD WRGKFDPFLL PPTPPREQLF DRYWSHVENC SSCKKAHKYL NALEVILQIA SVAMIGVMAV LKQTTMSNVA
501: RIAVLVAAVL SFAASKWLSH FIYKTFHYHD YNHAVV

Arabidopsis Description

PTC52Protochlorophyllide-dependent translocon component 52, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W496]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.