Factsheet for Os03t0805600-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion, nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035045_P001	Maize	plastid	29.76	39.61
Zm00001d002582_P001	Maize	peroxisome	33.17	31.78
Os03t0805900-00	Rice	plastid	39.02	28.57
TraesCS5D01G466600.1	Wheat	mitochondrion, plasma membrane, plastid	67.32	26.95
Zm00001d034523_P001	Maize	plastid	68.78	26.86
TraesCS5A01G456000.1	Wheat	plasma membrane, plastid	69.27	26.74
TraesCS5B01G465000.1	Wheat	golgi	69.27	26.74
TraesCS5D01G466800.3	Wheat	mitochondrion, plasma membrane, plastid	69.27	26.64
Os03t0805700-00	Rice	mitochondrion	68.29	26.32
EER93253	Sorghum	plastid	67.32	26.29
TraesCS7B01G038100.1	Wheat	mitochondrion	62.93	26.27
TraesCS5A01G455800.1	Wheat	plastid	66.83	25.09
HORVU5Hr1G109470.1	Barley	plastid	68.29	24.69
TraesCS7D01G137200.1	Wheat	golgi	61.95	24.33
TraesCS7B01G038300.1	Wheat	golgi	61.46	24.14
KXG37317	Sorghum	plastid	60.49	23.53
Solyc04g039870.1.1	Tomato	cytosol, peroxisome, plastid	15.12	23.13
HORVU7Hr1G028370.3	Barley	mitochondrion, peroxisome, plasma membrane	60.98	22.44
TraesCS7A01G137000.1	Wheat	plastid	62.44	22.42
KRH42827	Soybean	mitochondrion	15.12	21.53
TraesCS5B01G464800.1	Wheat	cytosol	26.83	18.97
PGSC0003DMT400007678	Potato	cytosol, peroxisome, plasma membrane	20.49	18.18
VIT_06s0004g00620.t01	Wine grape	cytosol, peroxisome, plasma membrane	38.05	16.85
VIT_06s0004g00610.t01	Wine grape	cytosol, plastid	41.95	16.44
Zm00001d011533_P001	Maize	plastid	31.22	15.92
KRH58922	Soybean	plastid	39.51	15.31
Bra013907.1-P	Field mustard	plastid	38.54	14.79
CDX89405	Canola	plastid	38.54	14.79
AT4G25650.2	Thale cress	plastid	40.0	14.67
KRH42828	Soybean	plastid	37.56	14.5
CDX94430	Canola	plastid	37.56	14.39
PGSC0003DMT400027602	Potato	plastid	38.05	14.36
Solyc04g040160.2.1	Tomato	plastid	37.56	14.15
Os03t0806300-00	Rice	peroxisome	35.61	12.72
GSMUA_Achr2P12380_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	25.37	11.9
Os03t0146400-01	Rice	plastid	27.32	10.59
Os02t0792800-01	Rice	plastid	21.95	8.35
Os10t0567400-01	Rice	mitochondrion	12.68	4.81
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	10.73	4.06
VIT_06s0004g00660.t01	Wine grape	cytosol	1.46	3.8
VIT_06s0004g00630.t01	Wine grape	cytosol	1.46	2.7
KRH05339	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.102.10.10	MapMan:35.1	UniProt:A0A0P0W4H7	ProteinID:BAS86940.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0051537	GO:GO:0055114
InterPro:IPR017941	InterPro:IPR036922	EnsemblPlantsGene:Os03g0805600	EnsemblPlants:Os03t0805600-00	PFAM:PF00355	PFscan:PS51296
PANTHER:PTHR21266	PANTHER:PTHR21266:SF38	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022	UniParc:UPI000393BBE8
SEG:seg	:	:	:	:	:

Description

Similar to pheophorbide a oxygenase. (Os03t0805600-00)

Coordinates

chr3:+:33638650..33641123

Molecular Weight (calculated)

21869.2 Da

IEP (calculated)

8.862

GRAVY (calculated)

0.191

Length

205 amino acids

Sequence
(BLAST)

001: MDALSLLLLP AARPARPALH LRDAAAAAAA ARVPPPRLPW SRAVARRLLS TSVAAVAAET PRAEDAPSAS GKEERFDWLD QWYPVAPVCD LDPGAPHGKT
101: VLGLRIVAWF DRTTAAADGG GGEWRVFDDS CPHRLAPLSE GRVALQVASV AVVGFLAVAK GTVVTSVVQR SAVVAAAVLC FAASRWLANF IEKNFYFQDY
201: VHAYK

Best Arabidopsis Sequence Match ( AT4G25650.2 )
(BLAST)

001: MEAALAACAL PSLRILNTKP RFRCSFSNPS LPISPNSLIT RKSSRFTTAV SSPPSSSAAT STNSPPEPEA LFEPGSDKFD WYANWYPVMP ICDLDKKVPH
101: GKKVMGIDLV VWWDRNEKQW KVMDDTCPHR LAPLSDGRID QWGRLQCVYH GWCFNGSGDC KLIPQAPPDG PPVHTFKQAC VAVYPSTVQH EIIWFWPNSD
201: PKYKNIIETN KPPYIPELED PSFTKLMGNR DIPYGYDVLV ENLMDPAHVP YAHYGLMRFP KPKGKYIICI SNSCFNPFTN LQILLAEKID REGGKPLEIN
301: VKKLDNKGFF SKQEWGYSNF IAPCVYRSST DPLPEQEHEY PAPAASDKAA LSKRRLSLIF ICIPVSPGRS RLIWTFPRNF GVFIDKIVPR WVFHIGQNTI
401: LDSDLHLLHV EERKILERGP ENWQKACFIP TKSDANVVTF RRWFNKYSEA RVDWRGKFDP FLLPPTPPRE QLFDRYWSHV ENCSSCKKAH KYLNALEVIL
501: QIASVAMIGV MAVLKQTTMS NVARIAVLVA AVLSFAASKW LSHFIYKTFH YHDYNHAVV

Arabidopsis Description

PTC52Protochlorophyllide-dependent translocon component 52, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W496]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.