Factsheet for Os03t0805900-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
peroxisome 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g039870.1.1	Tomato	cytosol, peroxisome, plastid	27.5	57.46
Zm00001d002582_P001	Maize	peroxisome	43.57	57.01
Os03t0805600-00	Rice	extracellular, mitochondrion	28.57	39.02
Zm00001d035045_P001	Maize	plastid	20.71	37.66
Os03t0805700-00	Rice	mitochondrion	69.64	36.65
TraesCS5B01G465000.1	Wheat	golgi	62.5	32.96
TraesCS5D01G466800.3	Wheat	mitochondrion, plasma membrane, plastid	62.5	32.83
TraesCS5A01G456000.1	Wheat	plasma membrane, plastid	61.43	32.39
TraesCS7B01G038300.1	Wheat	golgi	58.93	31.61
TraesCS5A01G455800.1	Wheat	plastid	61.43	31.5
Zm00001d034523_P001	Maize	plastid	58.93	31.43
EER93253	Sorghum	plastid	58.93	31.43
TraesCS7D01G137200.1	Wheat	golgi	58.21	31.23
PGSC0003DMT400007678	Potato	cytosol, peroxisome, plasma membrane	25.71	31.17
TraesCS5D01G466600.1	Wheat	mitochondrion, plasma membrane, plastid	56.07	30.66
HORVU5Hr1G109470.1	Barley	plastid	61.79	30.51
KXG37317	Sorghum	plastid	56.79	30.17
HORVU7Hr1G028370.3	Barley	mitochondrion, peroxisome, plasma membrane	57.14	28.73
TraesCS7A01G137000.1	Wheat	plastid	58.21	28.55
Os03t0806300-00	Rice	peroxisome	58.21	28.4
TraesCS7B01G038100.1	Wheat	mitochondrion	47.86	27.29
VIT_06s0004g00620.t01	Wine grape	cytosol, peroxisome, plasma membrane	44.29	26.78
VIT_06s0004g00610.t01	Wine grape	cytosol, plastid	47.14	25.24
KRH42828	Soybean	plastid	47.86	25.24
KRH58922	Soybean	plastid	47.5	25.14
GSMUA_Achr2P12380_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	37.86	24.26
PGSC0003DMT400027602	Potato	plastid	46.79	24.13
Solyc04g040160.2.1	Tomato	plastid	46.07	23.71
CDX89405	Canola	plastid	45.0	23.6
Bra013907.1-P	Field mustard	plastid	45.0	23.6
CDX94430	Canola	plastid	44.64	23.36
Zm00001d011533_P001	Maize	plastid	33.21	23.13
AT4G25650.2	Thale cress	plastid	45.71	22.9
Os03t0146400-01	Rice	plastid	32.14	17.01
Os02t0792800-01	Rice	plastid	28.57	14.84
Os10t0567400-01	Rice	mitochondrion	21.79	11.28
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	20.71	10.7
TraesCS5B01G464800.1	Wheat	cytosol	7.14	6.9
KRH05339	Soybean	cytosol	2.86	5.8
KRH42827	Soybean	mitochondrion	2.86	5.56
VIT_06s0004g00630.t01	Wine grape	cytosol	1.07	2.7
VIT_06s0004g00660.t01	Wine grape	cytosol	0.71	2.53

Protein Annotations

Gene3D:2.102.10.10	MapMan:35.1	UniProt:A0A0P0W4Y6	ProteinID:BAS86946.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010277	GO:GO:0016491	GO:GO:0051537
GO:GO:0055114	InterPro:IPR017941	InterPro:IPR036922	EnsemblPlantsGene:Os03g0805900	EnsemblPlants:Os03t0805900-00	PFAM:PF00355
PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF38	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022
SUPFAM:SSF55961	SignalP:SignalP-noTM	UniParc:UPI000393ACFF	SEG:seg	:	:

Description

Similar to Pheophorbide a oxygenase. (Os03t0805900-00)

Coordinates

chr3:+:33659567..33662028

Molecular Weight (calculated)

31768.0 Da

IEP (calculated)

8.771

GRAVY (calculated)

-0.492

Length

280 amino acids

Sequence
(BLAST)

001: MAPVSLHLLS LTRLSLPFRD TVTNPSTPRI PPWRRQWISP TDARRRRLSM PVSAVAAEAP LPRAVDEKET PAAGEERFDW LDQWYPVAPV RDLDKRKPHG
101: KMVMGISVVV WFDGGGGEWR VVDDACPHRL APLSEGRVDG KGCLQCAYHG WCFDGHGSCQ FIPQAPALGP PVHKNSKACV ASYPSVVQNN ILWFYPRSEP
201: EYKEILQRKR PPYIRELDDP SSVINSGVRD LLYGYELLVE NFMDPAHVPY AHRGQFPHVP REEDIGRYLN LTRKVASRSR

Best Arabidopsis Sequence Match ( AT4G25650.1 )
(BLAST)

001: MEAALAACAL PSLRILNTKP RFRCSFSNPS LPISPNSLIT RKSSRFTTAV SSPPSSSAAT STNSPPEPEA LFEPGSDKFD WYANWYPVMP ICDLDKKVPH
101: GKKVMGIDLV VWWDRNEKQW KVMDDTCPHR LAPLSDGRID QWGRLQCVYH GWCFNGSGDC KLIPQAPPDG PPVHTFKQAC VAVYPSTVQH EIIWFWPNSD
201: PKYKNIIETN KPPYIPELED PSFTKLMGNR DIPYGYDVLV ENLMDPAHVP YAHYGLMRFP KPKEKIDREG GKPLEINVKK LDNKGFFSKQ EWGYSNFIAP
301: CVYRSSTDPL PEQEHEYPAP AASDKAALSK RRLSLIFICI PVSPGRSRLI WTFPRNFGVF IDKIVPRWVF HIGQNTILDS DLHLLHVEER KILERGPENW
401: QKACFIPTKS DANVVTFRRW FNKYSEARVD WRGKFDPFLL PPTPPREQLF DRYWSHVENC SSCKKAHKYL NALEVILQIA SVAMIGVMAV LKQTTMSNVA
501: RIAVLVAAVL SFAASKWLSH FIYKTFHYHD YNHAVV

Arabidopsis Description

PTC52Protochlorophyllide-dependent translocon component 52, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W496]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.