Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g00630.t01 | Wine grape | cytosol | 58.23 | 41.44 |
| TraesCS5B01G464800.1 | Wheat | cytosol | 44.3 | 12.07 |
| EER90694 | Sorghum | cytosol | 43.04 | 11.56 |
| VIT_06s0004g00620.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 64.56 | 11.02 |
| GSMUA_Achr2P12380_001 | Banana | cytosol, mitochondrion, peroxisome, plasma membrane | 55.7 | 10.07 |
| VIT_06s0004g00610.t01 | Wine grape | cytosol, plastid | 54.43 | 8.22 |
| PGSC0003DMT400027602 | Potato | plastid | 54.43 | 7.92 |
| Solyc04g040160.2.1 | Tomato | plastid | 54.43 | 7.9 |
| Zm00001d034523_P001 | Maize | plastid | 48.1 | 7.24 |
| EER93253 | Sorghum | plastid | 48.1 | 7.24 |
| TraesCS5B01G465000.1 | Wheat | golgi | 46.84 | 6.97 |
| TraesCS5A01G456000.1 | Wheat | plasma membrane, plastid | 46.84 | 6.97 |
| TraesCS5D01G466800.3 | Wheat | mitochondrion, plasma membrane, plastid | 46.84 | 6.94 |
| Bra013907.1-P | Field mustard | plastid | 46.84 | 6.93 |
| CDX89405 | Canola | plastid | 46.84 | 6.93 |
| CDX94430 | Canola | plastid | 46.84 | 6.92 |
| TraesCS5D01G466600.1 | Wheat | mitochondrion, plasma membrane, plastid | 44.3 | 6.84 |
| TraesCS7D01G137200.1 | Wheat | golgi | 44.3 | 6.7 |
| HORVU5Hr1G109470.1 | Barley | plastid | 48.1 | 6.7 |
| AT4G25650.2 | Thale cress | plastid | 46.84 | 6.62 |
| TraesCS7B01G038100.1 | Wheat | mitochondrion | 40.51 | 6.52 |
| KXG37317 | Sorghum | plastid | 43.04 | 6.45 |
| Os03t0805700-00 | Rice | mitochondrion | 43.04 | 6.39 |
| TraesCS7B01G038300.1 | Wheat | golgi | 41.77 | 6.32 |
| TraesCS5A01G455800.1 | Wheat | plastid | 43.04 | 6.23 |
| TraesCS7A01G137000.1 | Wheat | plastid | 43.04 | 5.95 |
| HORVU7Hr1G028370.3 | Barley | mitochondrion, peroxisome, plasma membrane | 41.77 | 5.92 |
| PGSC0003DMT400007678 | Potato | cytosol, peroxisome, plasma membrane | 16.46 | 5.63 |
| Os03t0806300-00 | Rice | peroxisome | 40.51 | 5.57 |
| VIT_06s0061g00790.t01 | Wine grape | plastid | 22.78 | 3.34 |
| VIT_04s0008g07020.t01 | Wine grape | plastid | 20.25 | 2.94 |
| VIT_18s0001g02700.t01 | Wine grape | cytosol | 12.66 | 1.93 |
| Zm00001d011533_P001 | Maize | plastid | 7.59 | 1.49 |
| Os03t0805600-00 | Rice | extracellular, mitochondrion | 3.8 | 1.46 |
| Zm00001d002582_P001 | Maize | peroxisome | 2.53 | 0.93 |
| Os03t0805900-00 | Rice | plastid | 2.53 | 0.71 |
| Zm00001d035045_P001 | Maize | plastid | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_06s0004g00660 | EMBL:FN594951 | EnsemblPlants:VIT_06s0004g00660.t01 | EnsemblPlantsGene:VIT_06s0004g00660 | PANTHER:PTHR21266 | PANTHER:PTHR21266:SF38 |
| ProteinID:CBI16516 | ProteinID:CBI16516.3 | UniParc:UPI0001BE0D9D | UniProt:D7SLI8 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6:-:802422..803482
Molecular Weight (calculated)
9044.1 Da
IEP (calculated)
9.307
GRAVY (calculated)
-0.161
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MRQNLILDSA IYLPHVEEYK LMKAGLSNWQ KACFMPTKSD AHIIAFRAWL RKHSAGPCPQ LLPESSHITN ALNGLYCFR
001: MEATTRILST SSALNRLLLL SKLNLKSDPR NINSTNQLLH NAVTRKSSIS AARIRCSSLP ANANLFRSLF FLTSTFRLEN TAVHANPFRS EPNDGVAVWN
101: RAPRIVNGGG NAAIFGGNEG KETTVVLLGW LGAKAKHLRR YVEWYNSRGI NAVTFTVDVR DLLRLDLGRR LERRIAEFGN ELVNWVSEKE DDGREKCLVF
201: HSFSNTGWLV YGALLESFIG RQDLVERIKG CIIDSGGADP LDTKIWAAGF TAAILKKRSS TITTEPNSPI KEEDASTPQK KEPLGIENIM LSSLEKLFPI
301: FLNHPDVNTR LTKIIQKLYE NHPPCPQLYL YSSGDKVVPS HSVELRIREQ QKIGRKIHSF NFKSSPHVDH YRNFPDLYSS QLQNFLQECF TPTKQQAL
101: RAPRIVNGGG NAAIFGGNEG KETTVVLLGW LGAKAKHLRR YVEWYNSRGI NAVTFTVDVR DLLRLDLGRR LERRIAEFGN ELVNWVSEKE DDGREKCLVF
201: HSFSNTGWLV YGALLESFIG RQDLVERIKG CIIDSGGADP LDTKIWAAGF TAAILKKRSS TITTEPNSPI KEEDASTPQK KEPLGIENIM LSSLEKLFPI
301: FLNHPDVNTR LTKIIQKLYE NHPPCPQLYL YSSGDKVVPS HSVELRIREQ QKIGRKIHSF NFKSSPHVDH YRNFPDLYSS QLQNFLQECF TPTKQQAL
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8S8G6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.