Factsheet for Os03t0806300-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
peroxisome 2
plastid 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0805700-00	Rice	mitochondrion	54.7	59.02
Os03t0805900-00	Rice	plastid	28.4	58.21
Solyc04g039870.1.1	Tomato	cytosol, peroxisome, plastid	13.41	57.46
TraesCS5B01G464800.1	Wheat	cytosol	28.75	56.9
TraesCS5B01G465000.1	Wheat	golgi	52.09	56.31
TraesCS5A01G456000.1	Wheat	plasma membrane, plastid	52.09	56.31
TraesCS5D01G466800.3	Wheat	mitochondrion, plasma membrane, plastid	52.26	56.29
Zm00001d002582_P001	Maize	peroxisome	20.91	56.07
Zm00001d034523_P001	Maize	plastid	51.05	55.81
EER93253	Sorghum	plastid	50.35	55.05
TraesCS5A01G455800.1	Wheat	plastid	51.39	54.03
TraesCS5D01G466600.1	Wheat	mitochondrion, plasma membrane, plastid	47.56	53.32
TraesCS7B01G038300.1	Wheat	golgi	47.91	52.68
HORVU5Hr1G109470.1	Barley	plastid	51.74	52.38
TraesCS7D01G137200.1	Wheat	golgi	47.56	52.3
KXG37317	Sorghum	plastid	45.47	49.53
HORVU7Hr1G028370.3	Barley	mitochondrion, peroxisome, plasma membrane	47.74	49.19
TraesCS7B01G038100.1	Wheat	mitochondrion	41.64	48.68
PGSC0003DMT400007678	Potato	cytosol, peroxisome, plasma membrane	19.34	48.05
TraesCS7A01G137000.1	Wheat	plastid	47.21	47.46
GSMUA_Achr2P12380_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	36.06	47.37
VIT_06s0004g00620.t01	Wine grape	cytosol, peroxisome, plasma membrane	35.71	44.28
KRH58922	Soybean	plastid	39.55	42.91
KRH42828	Soybean	plastid	38.85	42.0
VIT_06s0004g00610.t01	Wine grape	cytosol, plastid	37.46	41.11
VIT_06s0004g00660.t01	Wine grape	cytosol	5.57	40.51
CDX89405	Canola	plastid	36.76	39.51
Bra013907.1-P	Field mustard	plastid	36.76	39.51
CDX94430	Canola	plastid	36.76	39.44
PGSC0003DMT400027602	Potato	plastid	37.28	39.41
Solyc04g040160.2.1	Tomato	plastid	36.41	38.42
KRH42827	Soybean	mitochondrion	9.58	38.19
AT4G25650.2	Thale cress	plastid	36.93	37.92
VIT_06s0004g00630.t01	Wine grape	cytosol	7.32	37.84
Os03t0805600-00	Rice	extracellular, mitochondrion	12.72	35.61
Zm00001d035045_P001	Maize	plastid	7.67	28.57
Os03t0146400-01	Rice	plastid	24.04	26.09
Zm00001d011533_P001	Maize	plastid	17.94	25.62
Os02t0792800-01	Rice	plastid	19.69	20.96
KRH05339	Soybean	cytosol	4.88	20.29
Os10t0567400-01	Rice	mitochondrion	12.72	13.49
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	12.37	13.1

Protein Annotations

Gene3D:2.102.10.10	Gene3D:3.30.530.90	MapMan:35.1	UniProt:A0A0P0W4T7	ProteinID:BAS86948.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010277	GO:GO:0016491
GO:GO:0051537	GO:GO:0055114	InterPro:IPR017941	InterPro:IPR036922	EnsemblPlantsGene:Os03g0806300	EnsemblPlants:Os03t0806300-00
PFAM:PF00355	PFAM:PF08417	PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF38	InterPro:PaO
InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022	SUPFAM:SSF55961	UniParc:UPI0003939BC4	SEG:seg

Description

Pheophorbide a oxygenase domain containing protein. (Os03t0806300-00)

Coordinates

chr3:+:33680875..33687737

Molecular Weight (calculated)

63865.7 Da

IEP (calculated)

8.773

GRAVY (calculated)

-0.305

Length

574 amino acids

Sequence
(BLAST)

001: MHQHGMAVVN AGAVGRDRDG GGAAGGRGGG AVRVAGPVVP VAPVCDLDPR RPHGKMVMGL SVVAWLDGGG EWRVVDDACP HRLAPLSEGR VDGKGRLQCA
101: YHGWCFDGHG SCQFIPQAPA LGPPVHKNSK ACVASYPSVV QNNILWFYPR SEPEYCDVLK RKRPPYVPEI DDDDPSHFMV YGVRDLLYGY ELLVENLMDP
201: AHVPYAHKGL FGELPKREDP ARVEFDLEHG SPMKMRIEEA SIDGFHSNLD GDWGYFKFVA PCTLYGTPFR TDLEVKKKKK KKPEVRVVLF TVPVAPGRSR
301: FIWASRYKVG GWLDKILPRW FYHMTSNTIL DSDTYLHVED RNITTVGLDN WHKACYVPTS SDNLVIAYRN WFRKYCNHQI GWANPNPTVK QQLPQTPTRD
401: QLLERYWSHV MQCTSCRAAL KGMRALEITL QVAAVAVVGF LAAGKETAVM SGVQRASPPP AGSPTSSRRP SISRIMSMLT NDASIQEICD VLLLLGICHE
501: PGLRRGFRLH RLAVSWPSWF RDAAINQQPK LETLWPCVCV IHAEARPGIQ SFSLSKNKRS QATAKGIHEE TASA

Best Arabidopsis Sequence Match ( AT4G25650.1 )
(BLAST)

001: MEAALAACAL PSLRILNTKP RFRCSFSNPS LPISPNSLIT RKSSRFTTAV SSPPSSSAAT STNSPPEPEA LFEPGSDKFD WYANWYPVMP ICDLDKKVPH
101: GKKVMGIDLV VWWDRNEKQW KVMDDTCPHR LAPLSDGRID QWGRLQCVYH GWCFNGSGDC KLIPQAPPDG PPVHTFKQAC VAVYPSTVQH EIIWFWPNSD
201: PKYKNIIETN KPPYIPELED PSFTKLMGNR DIPYGYDVLV ENLMDPAHVP YAHYGLMRFP KPKEKIDREG GKPLEINVKK LDNKGFFSKQ EWGYSNFIAP
301: CVYRSSTDPL PEQEHEYPAP AASDKAALSK RRLSLIFICI PVSPGRSRLI WTFPRNFGVF IDKIVPRWVF HIGQNTILDS DLHLLHVEER KILERGPENW
401: QKACFIPTKS DANVVTFRRW FNKYSEARVD WRGKFDPFLL PPTPPREQLF DRYWSHVENC SSCKKAHKYL NALEVILQIA SVAMIGVMAV LKQTTMSNVA
501: RIAVLVAAVL SFAASKWLSH FIYKTFHYHD YNHAVV

Arabidopsis Description

PTC52Protochlorophyllide-dependent translocon component 52, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W496]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.