Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52304 | Soybean | plastid | 74.64 | 19.07 |
| KRH61640 | Soybean | plasma membrane, plastid | 73.91 | 17.74 |
| TraesCS5B01G464800.1 | Wheat | cytosol | 23.19 | 11.03 |
| GSMUA_Achr2P12380_001 | Banana | cytosol, mitochondrion, peroxisome, plasma membrane | 24.64 | 7.78 |
| EER90694 | Sorghum | cytosol | 15.22 | 7.14 |
| Bra013907.1-P | Field mustard | plastid | 27.54 | 7.12 |
| CDX89405 | Canola | plastid | 27.54 | 7.12 |
| CDX94430 | Canola | plastid | 27.54 | 7.1 |
| KRH30552 | Soybean | plastid | 26.09 | 6.61 |
| AT4G25650.2 | Thale cress | plastid | 26.09 | 6.44 |
| KRH25120 | Soybean | plastid | 25.36 | 6.22 |
| KRH42828 | Soybean | plastid | 23.91 | 6.21 |
| TraesCS5B01G465000.1 | Wheat | golgi | 23.91 | 6.21 |
| TraesCS5A01G456000.1 | Wheat | plasma membrane, plastid | 23.91 | 6.21 |
| TraesCS5D01G466800.3 | Wheat | mitochondrion, plasma membrane, plastid | 23.91 | 6.19 |
| EER93253 | Sorghum | plastid | 23.19 | 6.1 |
| KRH58922 | Soybean | plastid | 23.19 | 6.05 |
| TraesCS5A01G455800.1 | Wheat | plastid | 23.91 | 6.04 |
| Os03t0805700-00 | Rice | mitochondrion | 23.19 | 6.02 |
| HORVU5Hr1G109470.1 | Barley | plastid | 23.91 | 5.82 |
| TraesCS7D01G137200.1 | Wheat | golgi | 21.74 | 5.75 |
| TraesCS7B01G038300.1 | Wheat | golgi | 21.74 | 5.75 |
| Zm00001d034523_P001 | Maize | plastid | 21.74 | 5.71 |
| TraesCS7B01G038100.1 | Wheat | mitochondrion | 20.29 | 5.7 |
| KXG37317 | Sorghum | plastid | 21.74 | 5.69 |
| HORVU7Hr1G028370.3 | Barley | mitochondrion, peroxisome, plasma membrane | 22.46 | 5.57 |
| TraesCS7A01G137000.1 | Wheat | plastid | 21.74 | 5.25 |
| TraesCS5D01G466600.1 | Wheat | mitochondrion, plasma membrane, plastid | 18.84 | 5.08 |
| Zm00001d011533_P001 | Maize | plastid | 14.49 | 4.98 |
| Os03t0806300-00 | Rice | peroxisome | 20.29 | 4.88 |
| KRH64672 | Soybean | plastid | 18.12 | 4.72 |
| KRH53240 | Soybean | plastid | 18.12 | 4.72 |
| KRH18716 | Soybean | golgi | 17.39 | 4.51 |
| KRH16353 | Soybean | cytosol, golgi, plastid | 17.39 | 4.49 |
| Zm00001d002582_P001 | Maize | peroxisome | 5.8 | 3.74 |
| Os03t0805900-00 | Rice | plastid | 5.8 | 2.86 |
| KRH42827 | Soybean | mitochondrion | 2.17 | 2.08 |
| Solyc04g039870.1.1 | Tomato | cytosol, peroxisome, plastid | 0.72 | 0.75 |
| Os03t0805600-00 | Rice | extracellular, mitochondrion | 0.0 | 0.0 |
| Zm00001d035045_P001 | Maize | plastid | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02010727 | EnsemblPlants:KRH05339 | EnsemblPlantsGene:GLYMA_17G221500 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0010277 | GO:GO:0055114 | InterPro:PaO | PANTHER:PTHR21266 | PANTHER:PTHR21266:SF29 |
| PFAM:PF08417 | ProteinID:KRH05339 | ProteinID:KRH05339.1 | UniParc:UPI00029506E5 | UniProt:K7MNB5 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr17:+:37406960..37407376
Molecular Weight (calculated)
16093.4 Da
IEP (calculated)
10.080
GRAVY (calculated)
-0.549
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAHVSISH DRTDWTAKRE DAQPLCFEVT ERLIGFAGWW GREKEGKNIP NFLSFRAPCV LQNNREIVDK NGETRYFSGV FLCTPTGQGQ GKSMLITRFG
101: RTKSLPLANM LPKWYLLQRA IKVFEKTWDS YHPKMRLW
101: RTKSLPLANM LPKWYLLQRA IKVFEKTWDS YHPKMRLW
001: MAVPFLSSSL QLTPTSPILF TKVTPTPIIH NHRSTCTIPT KPRLRLLRRS AVAGTAVSDQ TEGGGDVLLN PEEEKRVEVA DYDWTEEWYP LYLTKNVPED
101: APLGLTVYDR QIVLYKDGEG TLRCYEDRCP HRLAKLSEGQ LIDGRLECLY HGWQFEGEGK CVKIPQLPAS AKIPKAACVK TYEVKDSQGV VWVWMSTKTP
201: PNPEKLPWFE NFARPGFFDI STTHELPYDH SILLENLMDP AHVPISHDRT DFTAKREDAQ PLVFEVTERS NRGFAGTWGR EKEGGKGSNL LRFDAPCVLQ
301: NNREFEGKDG VKNYFSGLFL CRPTGQGKSM LIVRFGVTKR SPLVSVLPQW FWHQNACKVF EQDMGFLSSQ NEVLMKEKVP TKDLYLNLKS SDTWVAEYRK
401: WMDKVGHGMP YHFGHRTISL PKVPPVVEHA PAGLIAALSA SYPAKGGIGT MHAPNLANRY FRHIIHCRSC SNVIKSFELW KNILSATAVA LTALAILVVS
501: RQWKAVLLGS AALCSAAAYT CLRAINLNTN NFIRTHRRL
101: APLGLTVYDR QIVLYKDGEG TLRCYEDRCP HRLAKLSEGQ LIDGRLECLY HGWQFEGEGK CVKIPQLPAS AKIPKAACVK TYEVKDSQGV VWVWMSTKTP
201: PNPEKLPWFE NFARPGFFDI STTHELPYDH SILLENLMDP AHVPISHDRT DFTAKREDAQ PLVFEVTERS NRGFAGTWGR EKEGGKGSNL LRFDAPCVLQ
301: NNREFEGKDG VKNYFSGLFL CRPTGQGKSM LIVRFGVTKR SPLVSVLPQW FWHQNACKVF EQDMGFLSSQ NEVLMKEKVP TKDLYLNLKS SDTWVAEYRK
401: WMDKVGHGMP YHFGHRTISL PKVPPVVEHA PAGLIAALSA SYPAKGGIGT MHAPNLANRY FRHIIHCRSC SNVIKSFELW KNILSATAVA LTALAILVVS
501: RQWKAVLLGS AALCSAAAYT CLRAINLNTN NFIRTHRRL
Arabidopsis Description
TIC55Protein TIC 55, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SK50]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.