CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25120	Soybean	plastid	96.33	93.25
VIT_06s0061g00790.t01	Wine grape	plastid	73.39	74.21
Solyc11g066440.1.1	Tomato	plastid	71.01	72.07
Os03t0146400-01	Rice	plastid	69.17	71.27
Zm00001d027656_P001	Maize	plastid	67.52	70.77
EER95507	Sorghum	plastid	67.89	70.61
TraesCS4B01G311100.1	Wheat	golgi	67.34	70.17
PGSC0003DMT400001216	Potato	plastid	70.64	70.13
TraesCS4D01G309000.1	Wheat	mitochondrion	67.71	69.62
CDY29727	Canola	plastid	67.89	69.29
TraesCS4A01G411000.1	Wheat	plastid	67.71	69.1
Bra037607.1-P	Field mustard	plastid	67.71	68.84
HORVU4Hr1G079260.2	Barley	peroxisome	62.2	68.76
HORVU4Hr1G079330.1	Barley	plastid	67.34	68.47
AT3G44880.1	Thale cress	plastid	67.34	68.34
GSMUA_Achr4P25150_001	Banana	nucleus	67.16	66.18
CDY20340	Canola	plastid	67.71	64.51
KRH58922	Soybean	plastid	28.44	29.3
KRH42828	Soybean	plastid	28.26	29.0
KRH05339	Soybean	cytosol	6.61	26.09
KRH42827	Soybean	mitochondrion	6.79	25.69
KRH52304	Soybean	plastid	24.77	25.0
KRH61640	Soybean	plasma membrane, plastid	24.4	23.13
KRH16353	Soybean	cytosol, golgi, plastid	14.86	15.17
KRH53240	Soybean	plastid	14.68	15.09
KRH64672	Soybean	plastid	14.68	15.09
KRH18716	Soybean	golgi	14.5	14.85

Protein Annotations

EntrezGene:100812162	Gene3D:2.102.10.10	MapMan:7.12.6.7.5	EMBL:ACUP02007036	EnsemblPlantsGene:GLYMA_11G192300	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010277	GO:GO:0016491
GO:GO:0051537	GO:GO:0055114	UniProt:I1LKY8	InterPro:IPR017941	InterPro:IPR036922	EnsemblPlants:KRH30552
ProteinID:KRH30552	ProteinID:KRH30552.1	PFAM:PF00355	PFAM:PF08417	PFscan:PS51296	PANTHER:PTHR21266
PANTHER:PTHR21266:SF24	InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022	SUPFAM:SSF55961
UniParc:UPI000233C53B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:26543388..26548949

Molecular Weight (calculated)

61524.8 Da

IEP (calculated)

7.098

GRAVY (calculated)

-0.399

Length

545 amino acids

Sequence
(BLAST)

001: MALPHSISAL ATTLTLSSPI TKPHKVNPFP FSSNRNSQFL TKQTRPRSRR NLSLTPARVA APPSTVEADR LYPEAENNET EEEFSDESSS SKFTWRDHWY
101: PVSLIEDLNP LLPTPFQLLG REIVLWYDKS ISQWVAFDDK CPHRLAPLSE GRIDEDGKLQ CSYHGWSFDG CGSCVKIPQA SSEGPEARAI GSPKACATRF
201: PTLVSQGLLF VWPDENGWEK AKASKPPMLP DDFDKPEFAT VNIQRDLFYG YDTLMENVSD PSHIEFAHHK VTGRRDRAKP LPFKMDSRGS WGFSGANEGN
301: PQISAKFVAP CYMMNKIEID TKLPVVGDQK WVVWICSFNV PMAPGKTRSI VCSARNFFQF SVPGPAWWQV VPRWYEHWTS NKVYDGDMIV LQGQEKIFLS
401: ETKEGGDINK QYTNITFTPT QADRFVLAFR NWLRRHGNGQ PEWFGNSSDQ PLPSTVLSKR QMLDRFEQHT LKCSSCKAAY EGFQTWQKVL IGATVVFCAT
501: SGIPSDFQLR VLLAGLAVVS AAIAFALNQL QKNFEFVDYV HAEID

Best Arabidopsis Sequence Match ( AT3G44880.1 )
(BLAST)

001: MSVVLLSSTS ATITKSQSKK IPFLSPTTKF PLKVSISPSR SKLFHNPLRV AAPPSVPTSD STEEKRIEEE YGGDKEEEGS EFKWRDHWYP VSLVEDLDPN
101: VPTPFQLLGR DLVLWFDRND QKWAAFDDLC PHRLAPLSEG RLDENGHLQC SYHGWSFGGC GSCTRIPQAA TSGPEARAVK SPRACAIKFP TMVSQGLLFV
201: WPDENGWDRA NSIEPPRLPD DFDKPEFSTV TIQRDLFYGY DTLMENVSDP SHIDFAHHKV TGRRDRAKPL PFKVESSGPW GFQGANDDSP RITAKFVAPC
301: YSMNKIELDA KLPIVGNQKW VIWICSFNIP MAPGKTRSIV CSARNFFQFS VPGPAWWQVV PRWYEHWTSN LVYDGDMIVL QGQEKVFLAK SMESPDYDVN
401: KQYTKLTFTP TQADRFVLAF RNWLRRHGKS QPEWFGSTPS NQPLPSTVLT KRQMLDRFDQ HTQVCSSCKG AYNSFQILKK FLVGATVFWA ATAGVPSDVQ
501: IRLVLAGLSL ISAASAYALH EQEKNFVFRD YVHSEIE

Arabidopsis Description

PAOPheophorbide a oxygenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.