CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16353	Soybean	cytosol, golgi, plastid	97.18	96.82
KRH64672	Soybean	plastid	86.84	87.17
KRH53240	Soybean	plastid	85.53	85.85
VIT_18s0001g02700.t01	Wine grape	cytosol	79.89	82.05
Solyc11g012850.1.1	Tomato	plastid	80.83	80.37
PGSC0003DMT400045302	Potato	plastid	80.83	80.37
Solyc06g060310.2.1	Tomato	golgi	80.64	80.19
PGSC0003DMT400002345	Potato	plastid	80.64	80.19
CDY36339	Canola	plastid	74.62	75.76
Bra036948.1-P	Field mustard	plastid	75.94	75.66
AT1G44446.1	Thale cress	plastid	76.13	75.56
CDY63862	Canola	plastid	75.38	75.52
CDY14980	Canola	plastid	75.75	75.47
GSMUA_Achr6P18880_001	Banana	mitochondrion, plastid	75.75	74.63
GSMUA_Achr6P25590_001	Banana	plastid	76.69	74.32
Os10t0567400-01	Rice	mitochondrion	75.0	73.75
EES04263	Sorghum	cytosol	74.81	73.43
Zm00001d011819_P001	Maize	plastid	74.44	73.06
Zm00001d042026_P001	Maize	cytosol	68.98	72.39
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	69.17	67.9
HORVU0Hr1G007360.2	Barley	mitochondrion	69.92	67.64
TraesCS3D01G514100.1	Wheat	mitochondrion	69.74	67.45
TraesCS3A01G506200.1	Wheat	mitochondrion	69.55	67.27
TraesCS3B01G574300.1	Wheat	mitochondrion	69.55	67.27
Zm00001d004531_P001	Maize	extracellular, plastid	22.93	44.36
KRH05339	Soybean	cytosol	4.51	17.39
KRH52304	Soybean	plastid	15.98	15.74
KRH61640	Soybean	plasma membrane, plastid	15.98	14.78
KRH30552	Soybean	plastid	14.85	14.5
KRH58922	Soybean	plastid	14.29	14.37
KRH42828	Soybean	plastid	14.1	14.12
KRH25120	Soybean	plastid	14.85	14.03
KRH42827	Soybean	mitochondrion	2.07	7.64

Protein Annotations

EntrezGene:100805998	Gene3D:2.102.10.10	MapMan:7.12.6.6.1	UniProt:A0A0R4J4N3	EMBL:ACUP02008120	ncoils:Coil
EnsemblPlantsGene:GLYMA_13G078400	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0010277	GO:GO:0016491	GO:GO:0016705	GO:GO:0051537	GO:GO:0055114
InterPro:IPR017941	InterPro:IPR036922	EnsemblPlants:KRH18716	ProteinID:KRH18716	ProteinID:KRH18716.1	PFAM:PF00355
PFAM:PF08417	ScanProsite:PS00570	PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF19	InterPro:PaO
InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	InterPro:Ring-hydroxy_dOase_2Fe2S_BS	SUPFAM:SSF50022	SUPFAM:SSF55961	UniParc:UPI000199A3E7
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:18427751..18433749

Molecular Weight (calculated)

60446.7 Da

IEP (calculated)

7.811

GRAVY (calculated)

-0.380

Length

532 amino acids

Sequence
(BLAST)

001: MNAIATASAL SLPIFLRAGK LDTKRDLKGR FRVFAVFGEE EKKNAWGALF DVEDPRSKFP QNKGKVLDIS QALEVARHDI QYLDWRARQD VLTIMHLHEK
101: VVEVLNPLAR EYKSIGTLKK ELAELQDELA QAHTQVHISE ARVTTALDKL AYMEELVNDR LLQDRSTTDV AQTSSSPSTS ANSLVTEKRR QPRKSLNVSG
201: PVQSYHPHLK NFWYPVAFSN DLKDDTMIPI ECFEEPWVIF RGKDGKPGCV QNTCAHRACP LHLGSVNEGR IQCPYHGWEY TTDGKCEKMP STRQLNVKIK
301: SVPCFEKEGM IWIWPGNDPP AATLPSILPP SGFEIHAEIV MELPIEHGLL LDNLLDLAHA PFTHTSTFAK GWSVPSLVNF LTPASGLQGY WDPYPIDMEF
401: RPPCMVLSTI GISKPGKLEG QSTRECSTHL HQLHVCLPSS KQKTRLLYRM SLDFAPLLKH IPLMKYLWRH FAEQVLNEDL RLVVGQQERM NNGANVWNFP
501: VAYDKLGVRY RMWRDALERG AKQLPFSPQH ID

Best Arabidopsis Sequence Match ( AT1G44446.1 )
(BLAST)

001: MNAAVFSPSA LSLPISFSKT RSSFLSRKKG VKGEFRVFAV FGDESGLVEK KSQWRPLFDV EDPRSKAPPY KGKFLDVNQA IEVARFDIQY LDWRARQDLL
101: TIMILHDKVV DVLNPLAREY KSIGTVKKEL AGLQEELSKA HQQVHISEAR VSTALDKLAH MEELVNDRLL PGRVVTELDK PSSSTTASAV ELDREKTNTG
201: AKSLNVSGPV PPYSPHLKNF WYPVAFTADL KHDTMVPIEC FEQPWVIFRG EDGKPGCVRN TCAHRACPLD LGTVNEGRIQ CPYHGWEYST DGECKKMPST
301: KLLKVKIKSL PCLEQEGMIW IWPGDEPPAP ILPSLQPPSG FLIHAELVMD LPVEHGLLLD NLLDLAHAPF THTSTFAKGW SVPSLVKFLT PTSGLQGYWD
401: PYPIDMEFKP PCIVLSTIGI SKPGKLEGKS TQQCATHLHQ LHVCLPSSKN KTRLLYRMSL DFAPILKNLP FMEHLWRHFA EQVLNEDLRL VLGQQERMLN
501: GANIWNLPVA YDKLGVRYRL WRNAVDRGDD KLPFSG

Arabidopsis Description

CAOCH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6L1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.