Factsheet for HORVU0Hr1G007360.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G514100.1	Wheat	mitochondrion	99.64	99.64
TraesCS3A01G506200.1	Wheat	mitochondrion	99.45	99.45
TraesCS3B01G574300.1	Wheat	mitochondrion	98.91	98.91
Os10t0567400-01	Rice	mitochondrion	86.36	87.8
EES04263	Sorghum	cytosol	84.36	85.61
Zm00001d011819_P001	Maize	plastid	84.0	85.24
Zm00001d042026_P001	Maize	cytosol	74.73	81.07
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	77.09	78.23
VIT_18s0001g02700.t01	Wine grape	cytosol	68.91	73.17
KRH64672	Soybean	plastid	69.45	72.08
PGSC0003DMT400002345	Potato	plastid	69.45	71.4
KRH53240	Soybean	plastid	68.55	71.13
Solyc11g012850.1.1	Tomato	plastid	69.09	71.03
GSMUA_Achr6P18880_001	Banana	mitochondrion, plastid	69.27	70.56
GSMUA_Achr6P25590_001	Banana	plastid	70.36	70.49
KRH16353	Soybean	cytosol, golgi, plastid	68.18	70.22
CDY36339	Canola	plastid	66.73	70.04
Bra036948.1-P	Field mustard	plastid	68.0	70.04
KRH18716	Soybean	golgi	67.64	69.92
PGSC0003DMT400045302	Potato	plastid	68.0	69.91
CDY14980	Canola	plastid	67.82	69.85
CDY63862	Canola	plastid	67.27	69.68
Solyc06g060310.2.1	Tomato	golgi	67.64	69.53
AT1G44446.1	Thale cress	plastid	67.64	69.4
Zm00001d004531_P001	Maize	extracellular, plastid	24.0	48.0
HORVU6Hr1G084510.1	Barley	plastid	16.18	15.64
HORVU4Hr1G079330.1	Barley	plastid	13.82	14.18
HORVU5Hr1G109470.1	Barley	plastid	13.82	13.4
HORVU4Hr1G079260.2	Barley	peroxisome	12.0	13.39
HORVU7Hr1G028370.3	Barley	mitochondrion, peroxisome, plasma membrane	12.36	12.21

Protein Annotations

Gene3D:2.102.10.10	MapMan:7.12.6.6.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0009706
GO:GO:0009987	GO:GO:0010277	GO:GO:0015995	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705
GO:GO:0042651	GO:GO:0051537	GO:GO:0055114	EnsemblPlantsGene:HORVU0Hr1G007360	EnsemblPlants:HORVU0Hr1G007360.2	UniProt:I1X0L6
InterPro:IPR017941	InterPro:IPR036922	EMBL:JQ627620	PFAM:PF00355	PFAM:PF08417	ScanProsite:PS00570
PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF19	InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf
InterPro:Ring-hydroxy_dOase_2Fe2S_BS	SUPFAM:SSF50022	SUPFAM:SSF55961	UniParc:UPI00025D9614	SEG:seg	:

Description

Chlorophyllide a oxygenase [Source:UniProtKB/TrEMBL;Acc:I1X0L6]

Coordinates

chrchrUn:-:42080540..42084179

Molecular Weight (calculated)

62062.5 Da

IEP (calculated)

7.397

GRAVY (calculated)

-0.303

Length

550 amino acids

Sequence
(BLAST)

001: MTTVASLSLV PHLLIKPSFR CLSRKGVGRY GGIKVYAVLR DDSADYLKDN HHWEALFHVD DPGPRVPIEK GQYLEAKQAL DVVRFDIQYC DWRARQDLLT
101: IMVLHNKVVE VLNPLARDFK SVGTLRKDLD GLQEELAKAH NQLYLSESRV SSALDKLAQM ETVVNERLLS DGSAFANTAD CASLDPSTSL DTTTSTSSTV
201: RVGAKKPKRR SLNISGPVKP YSANLKNFWY PVAFSGDLKD DTMVPIDCFE EQWVIFRGKD KRPGCVQNTC AHRACPLDLG SVNEGRITCP YHGWEYSTDG
301: KCEKMPSTKM LNVRIRALPC FEQEGMVWIW PGDDTPTPTI PSLLPPSGFT IHAEIVMELP VEHGLLLDNL LDLAHAPFTH TSTFAKGWSV PSFVKFLTPT
401: SGLQGYWDPY PIDMEFRPPC MVLSTIGISK PGKLEGKSTQ QCATHLHQLH VCLPSSTNKT RLLYRMSLDF APWMKHMPFM HLLWSHFAEK VLNEDLRLVL
501: GQQDRMNNGA NVWNWPVSYD KLGIRYRLWR DAVERGVDRL PFSNEIESGS

Best Arabidopsis Sequence Match ( AT1G44446.1 )
(BLAST)

001: MNAAVFSPSA LSLPISFSKT RSSFLSRKKG VKGEFRVFAV FGDESGLVEK KSQWRPLFDV EDPRSKAPPY KGKFLDVNQA IEVARFDIQY LDWRARQDLL
101: TIMILHDKVV DVLNPLAREY KSIGTVKKEL AGLQEELSKA HQQVHISEAR VSTALDKLAH MEELVNDRLL PGRVVTELDK PSSSTTASAV ELDREKTNTG
201: AKSLNVSGPV PPYSPHLKNF WYPVAFTADL KHDTMVPIEC FEQPWVIFRG EDGKPGCVRN TCAHRACPLD LGTVNEGRIQ CPYHGWEYST DGECKKMPST
301: KLLKVKIKSL PCLEQEGMIW IWPGDEPPAP ILPSLQPPSG FLIHAELVMD LPVEHGLLLD NLLDLAHAPF THTSTFAKGW SVPSLVKFLT PTSGLQGYWD
401: PYPIDMEFKP PCIVLSTIGI SKPGKLEGKS TQQCATHLHQ LHVCLPSSKN KTRLLYRMSL DFAPILKNLP FMEHLWRHFA EQVLNEDLRL VLGQQERMLN
501: GANIWNLPVA YDKLGVRYRL WRNAVDRGDD KLPFSG

Arabidopsis Description

CAOCH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6L1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.