Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036948.1-P | Field mustard | plastid | 91.42 | 91.76 |
| CDY14980 | Canola | plastid | 91.42 | 91.76 |
| CDY36339 | Canola | plastid | 88.99 | 91.03 |
| CDY63862 | Canola | plastid | 89.37 | 90.21 |
| VIT_18s0001g02700.t01 | Wine grape | cytosol | 75.56 | 78.19 |
| KRH64672 | Soybean | plastid | 76.87 | 77.74 |
| KRH53240 | Soybean | plastid | 76.68 | 77.55 |
| Solyc11g012850.1.1 | Tomato | plastid | 76.49 | 76.64 |
| PGSC0003DMT400002345 | Potato | plastid | 76.31 | 76.45 |
| KRH18716 | Soybean | golgi | 75.56 | 76.13 |
| KRH16353 | Soybean | cytosol, golgi, plastid | 75.56 | 75.84 |
| Solyc06g060310.2.1 | Tomato | golgi | 75.56 | 75.7 |
| PGSC0003DMT400045302 | Potato | plastid | 75.0 | 75.14 |
| EES04263 | Sorghum | cytosol | 72.57 | 71.77 |
| Zm00001d042026_P001 | Maize | cytosol | 67.35 | 71.2 |
| Os10t0567400-01 | Rice | mitochondrion | 71.64 | 70.98 |
| Zm00001d011819_P001 | Maize | plastid | 71.46 | 70.66 |
| GSMUA_Achr6P18880_001 | Banana | mitochondrion, plastid | 70.34 | 69.81 |
| GSMUA_Achr6P25590_001 | Banana | plastid | 71.27 | 69.58 |
| HORVU0Hr1G007360.2 | Barley | mitochondrion | 69.4 | 67.64 |
| TraesCS3A01G506200.1 | Wheat | mitochondrion | 69.22 | 67.45 |
| TraesCS3D01G514100.1 | Wheat | mitochondrion | 69.22 | 67.45 |
| TraesCS3B01G574300.1 | Wheat | mitochondrion | 68.84 | 67.09 |
| Os10t0567100-01 | Rice | peroxisome, plasma membrane, plastid | 67.35 | 66.61 |
| Zm00001d004531_P001 | Maize | extracellular, plastid | 23.13 | 45.09 |
| AT2G24820.1 | Thale cress | plastid | 15.3 | 15.21 |
| AT4G25650.2 | Thale cress | plastid | 15.49 | 14.85 |
| AT3G44880.1 | Thale cress | plastid | 14.18 | 14.15 |
Protein Annotations
| Gene3D:2.102.10.10 | MapMan:7.12.6.6.1 | EntrezGene:841029 | UniProt:A0A178W6L1 | ProteinID:AAD54323.1 | ProteinID:AAK43487.1 |
| EMBL:AB021316 | ProteinID:AEE32034.1 | ProteinID:AEE32035.1 | ProteinID:AEE32036.1 | EMBL:AK228645 | ProteinID:ANM59317.1 |
| ArrayExpress:AT1G44446 | EnsemblPlantsGene:AT1G44446 | RefSeq:AT1G44446 | TAIR:AT1G44446 | RefSeq:AT1G44446-TAIR-G | EnsemblPlants:AT1G44446.1 |
| TAIR:AT1G44446.1 | EMBL:AY128357 | Unigene:At.19047 | ProteinID:BAA90462.1 | EMBL:BT002075 | Symbol:CH1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009706 | GO:GO:0009987 |
| GO:GO:0010277 | GO:GO:0015995 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0031969 |
| GO:GO:0042651 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051537 | GO:GO:0055114 | InterPro:IPR017941 |
| InterPro:IPR036922 | RefSeq:NP_001321683.1 | RefSeq:NP_175088.1 | RefSeq:NP_973969.1 | RefSeq:NP_973970.1 | ProteinID:OAP13786.1 |
| PFAM:PF00355 | PFAM:PF08417 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00570 | PFscan:PS51296 | PANTHER:PTHR21266 | PANTHER:PTHR21266:SF19 | InterPro:PaO |
| UniProt:Q9MBA1 | InterPro:Rieske_2Fe-2S | InterPro:Rieske_2Fe-2S_sf | InterPro:Ring-hydroxy_dOase_2Fe2S_BS | SUPFAM:SSF50022 | SUPFAM:SSF55961 |
| UniParc:UPI00000AC669 | SEG:seg | : | : | : | : |
Description
CAOCH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6L1]
Coordinates
chr1:-:16848308..16851271
Molecular Weight (calculated)
60333.9 Da
IEP (calculated)
7.962
GRAVY (calculated)
-0.281
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MNAAVFSPSA LSLPISFSKT RSSFLSRKKG VKGEFRVFAV FGDESGLVEK KSQWRPLFDV EDPRSKAPPY KGKFLDVNQA IEVARFDIQY LDWRARQDLL
101: TIMILHDKVV DVLNPLAREY KSIGTVKKEL AGLQEELSKA HQQVHISEAR VSTALDKLAH MEELVNDRLL PGRVVTELDK PSSSTTASAV ELDREKTNTG
201: AKSLNVSGPV PPYSPHLKNF WYPVAFTADL KHDTMVPIEC FEQPWVIFRG EDGKPGCVRN TCAHRACPLD LGTVNEGRIQ CPYHGWEYST DGECKKMPST
301: KLLKVKIKSL PCLEQEGMIW IWPGDEPPAP ILPSLQPPSG FLIHAELVMD LPVEHGLLLD NLLDLAHAPF THTSTFAKGW SVPSLVKFLT PTSGLQGYWD
401: PYPIDMEFKP PCIVLSTIGI SKPGKLEGKS TQQCATHLHQ LHVCLPSSKN KTRLLYRMSL DFAPILKNLP FMEHLWRHFA EQVLNEDLRL VLGQQERMLN
501: GANIWNLPVA YDKLGVRYRL WRNAVDRGDD KLPFSG
101: TIMILHDKVV DVLNPLAREY KSIGTVKKEL AGLQEELSKA HQQVHISEAR VSTALDKLAH MEELVNDRLL PGRVVTELDK PSSSTTASAV ELDREKTNTG
201: AKSLNVSGPV PPYSPHLKNF WYPVAFTADL KHDTMVPIEC FEQPWVIFRG EDGKPGCVRN TCAHRACPLD LGTVNEGRIQ CPYHGWEYST DGECKKMPST
301: KLLKVKIKSL PCLEQEGMIW IWPGDEPPAP ILPSLQPPSG FLIHAELVMD LPVEHGLLLD NLLDLAHAPF THTSTFAKGW SVPSLVKFLT PTSGLQGYWD
401: PYPIDMEFKP PCIVLSTIGI SKPGKLEGKS TQQCATHLHQ LHVCLPSSKN KTRLLYRMSL DFAPILKNLP FMEHLWRHFA EQVLNEDLRL VLGQQERMLN
501: GANIWNLPVA YDKLGVRYRL WRNAVDRGDD KLPFSG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.