CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14980	Canola	plastid	94.27	92.51
CDY63862	Canola	plastid	92.18	90.96
AT1G44446.1	Thale cress	plastid	91.03	88.99
VIT_18s0001g02700.t01	Wine grape	cytosol	76.34	77.22
KRH64672	Soybean	plastid	77.48	76.6
KRH53240	Soybean	plastid	77.29	76.42
Solyc11g012850.1.1	Tomato	plastid	77.48	75.89
PGSC0003DMT400002345	Potato	plastid	77.1	75.51
KRH18716	Soybean	golgi	75.76	74.62
Solyc06g060310.2.1	Tomato	golgi	75.95	74.39
PGSC0003DMT400045302	Potato	plastid	75.57	74.02
KRH16353	Soybean	cytosol, golgi, plastid	75.38	73.97
EES04263	Sorghum	cytosol	74.05	71.59
Os10t0567400-01	Rice	mitochondrion	73.66	71.35
Zm00001d042026_P001	Maize	cytosol	67.94	70.22
Zm00001d011819_P001	Maize	plastid	72.52	70.11
GSMUA_Achr6P18880_001	Banana	mitochondrion, plastid	71.56	69.44
GSMUA_Achr6P25590_001	Banana	plastid	72.52	69.22
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	69.08	66.79
HORVU0Hr1G007360.2	Barley	mitochondrion	70.04	66.73
TraesCS3D01G514100.1	Wheat	mitochondrion	70.04	66.73
TraesCS3A01G506200.1	Wheat	mitochondrion	70.04	66.73
TraesCS3B01G574300.1	Wheat	mitochondrion	69.66	66.36
Zm00001d004531_P001	Maize	extracellular, plastid	23.28	44.36
CDY38514	Canola	plastid	9.35	20.85
CDX83228	Canola	plastid	16.6	16.08
CDY38513	Canola	plastid	16.6	16.08
CDY38515	Canola	plastid	16.41	15.9
CDX89405	Canola	plastid	15.08	14.79
CDY29727	Canola	plastid	15.08	14.79
CDX94430	Canola	plastid	15.08	14.77
CDY20340	Canola	plastid	14.89	13.64

Protein Annotations

Gene3D:2.102.10.10	MapMan:7.12.6.6.1	GO:A0A078HFZ5	UniProt:A0A078HFZ5	EnsemblPlants:CDY36339	ProteinID:CDY36339
ProteinID:CDY36339.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0010277	GO:GO:0016491	GO:GO:0016705	GO:GO:0051537
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00060352001	InterPro:IPR017941	InterPro:IPR036922	PFAM:PF00355	PFAM:PF08417
ScanProsite:PS00570	PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF19	InterPro:PaO	InterPro:Rieske_2Fe-2S
InterPro:Rieske_2Fe-2S_sf	InterPro:Ring-hydroxy_dOase_2Fe2S_BS	SUPFAM:SSF50022	SUPFAM:SSF55961	UniParc:UPI0004EAD3F0	SEG:seg

Description

BnaC08g05120DBnaC08g05120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFZ5]

Coordinates

chrLK032373:-:267365..270044

Molecular Weight (calculated)

59189.5 Da

IEP (calculated)

8.215

GRAVY (calculated)

-0.336

Length

524 amino acids

Sequence
(BLAST)

001: MNAAVFASSA LSLPISFCKT RSSKLTRKKG LKGELRVEEK KSQWGPLFDV EDPRSKLSPY KGKFLDVNQA LEVARFDIQY LDWRARQDLL TIMLLHDKVV
101: DVLNPLARQY KSIGIVKKEL AELQEELAKA HQQVHISEAR VSTALDKLAH MEELVNDRLL LARNATESDK PSTPTSVQDL DREKTNIGAK SLNVSGPVQP
201: YSPNLKNFWY PVAFTADLKH DTMVPIDCFE QPWVIFRGED GKPGCVRNTC AHRACPLDLG TVKEGRIQCP YHGWEYSTDG NCTKMPSTKL LNVKIKSIPC
301: LEQDGMIWVW PGDEPPSPTL PSLKPPSGFV IHAELVMDLP VEHGLLLDNL LDLAHAPFTH TSTFAKGWSV PSLVKFLTPS SGLQGYWDPY PIDMEFKPPC
401: IVLSTIGISK PGKLEGKSTK QCETHLHQLH VCLPSSRNKT RLLYRMSLDF APILKNLPFM EHLWRHFAEQ VLNEDLRLVL GQQERMLNGA NIWNLPVAYD
501: KLGVRYRLWR NAVDRGDDKL PFSG

Best Arabidopsis Sequence Match ( AT1G44446.1 )
(BLAST)

001: MNAAVFSPSA LSLPISFSKT RSSFLSRKKG VKGEFRVFAV FGDESGLVEK KSQWRPLFDV EDPRSKAPPY KGKFLDVNQA IEVARFDIQY LDWRARQDLL
101: TIMILHDKVV DVLNPLAREY KSIGTVKKEL AGLQEELSKA HQQVHISEAR VSTALDKLAH MEELVNDRLL PGRVVTELDK PSSSTTASAV ELDREKTNTG
201: AKSLNVSGPV PPYSPHLKNF WYPVAFTADL KHDTMVPIEC FEQPWVIFRG EDGKPGCVRN TCAHRACPLD LGTVNEGRIQ CPYHGWEYST DGECKKMPST
301: KLLKVKIKSL PCLEQEGMIW IWPGDEPPAP ILPSLQPPSG FLIHAELVMD LPVEHGLLLD NLLDLAHAPF THTSTFAKGW SVPSLVKFLT PTSGLQGYWD
401: PYPIDMEFKP PCIVLSTIGI SKPGKLEGKS TQQCATHLHQ LHVCLPSSKN KTRLLYRMSL DFAPILKNLP FMEHLWRHFA EQVLNEDLRL VLGQQERMLN
501: GANIWNLPVA YDKLGVRYRL WRNAVDRGDD KLPFSG

Arabidopsis Description

CAOCH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6L1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.