Factsheet for Zm00001d004531_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011819_P001	Maize	plastid	52.73	26.75
Zm00001d042026_P001	Maize	cytosol	48.0	26.04
EES04263	Sorghum	cytosol	50.91	25.83
Os10t0567400-01	Rice	mitochondrion	49.45	25.14
VIT_18s0001g02700.t01	Wine grape	cytosol	45.45	24.13
TraesCS3D01G514100.1	Wheat	mitochondrion	48.0	24.0
TraesCS3B01G574300.1	Wheat	mitochondrion	48.0	24.0
TraesCS3A01G506200.1	Wheat	mitochondrion	48.0	24.0
HORVU0Hr1G007360.2	Barley	mitochondrion	48.0	24.0
Solyc11g012850.1.1	Tomato	plastid	46.55	23.93
PGSC0003DMT400002345	Potato	plastid	46.18	23.74
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	46.55	23.62
Solyc06g060310.2.1	Tomato	golgi	45.82	23.55
KRH53240	Soybean	plastid	45.09	23.4
PGSC0003DMT400045302	Potato	plastid	45.45	23.36
GSMUA_Achr6P18880_001	Banana	mitochondrion, plastid	45.82	23.33
CDY36339	Canola	plastid	44.36	23.28
KRH16353	Soybean	cytosol, golgi, plastid	45.09	23.22
KRH64672	Soybean	plastid	44.73	23.21
AT1G44446.1	Thale cress	plastid	45.09	23.13
CDY63862	Canola	plastid	44.36	22.98
KRH18716	Soybean	golgi	44.36	22.93
CDY14980	Canola	plastid	44.36	22.85
Bra036948.1-P	Field mustard	plastid	44.36	22.85
GSMUA_Achr6P25590_001	Banana	plastid	43.27	21.68
Zm00001d002582_P001	Maize	peroxisome	9.09	11.68
Zm00001d018358_P001	Maize	plastid	20.0	10.22
Zm00001d034523_P001	Maize	plastid	18.18	9.52
Zm00001d027656_P001	Maize	plastid	14.18	7.5
Zm00001d011533_P001	Maize	plastid	10.18	6.97
Zm00001d035045_P001	Maize	plastid	0.73	1.3

Protein Annotations

EnsemblPlants:Zm00001d004531_P001	EnsemblPlants:Zm00001d004531_T001	EnsemblPlantsGene:Zm00001d004531	PANTHER:PTHR21266	PANTHER:PTHR21266:SF19	PFAM:PD208950
ProteinID:ONM19081.1	SEG:seg	SUPFAM:SSF55961	UniParc:UPI000844A589	UniProt:A0A1D6EFX5	MapMan:35.1

Description

Chlorophyllide a oxygenase chloroplastic

Coordinates

chr2:+:116800854..116802446

Molecular Weight (calculated)

30969.3 Da

IEP (calculated)

6.505

GRAVY (calculated)

0.016

Length

275 amino acids

Sequence
(BLAST)

001: MPACVAGLIP AVVLANYTKS QYNRFLNDSQ FSGVEIASEG DWVVVVLSTS TGSGDYSPVM LNVRIQSLPC FEQEGMVWIW PRDDPPKATI PSLLPPSGFT
101: VHAEIVMELP VEHGLLLDNL LDLAHAPFTH TSTFAKGWSV PRYVLNEDLR LVLGQQERMI NGANVWNWPV SYDKLGVRYR LWRDTVERGF ERLPFSNQAE
201: SGSQLAGGPL NFFLVKFIRE TMARISYLGV CLCALLPDAA ASIWKAKVDG QHHRLSLSLL WCLNVNYRWH HEMQL

Best Arabidopsis Sequence Match ( AT5G19250.1 )
(BLAST)

001: MAISKLHLLF LLSVFLSLHP LVLSDTADEE DVLLTGINSY RASLNLTTLI HNHNAECLAD EIADQFKNQP CTNTTGSASV PGTTPGFPNL PNLLSKCRLN
101: PTVTRDGAIL PACVPNLDPS LVLTNFTMSQ YSKDLNDSKF TGIGIGSDDN WIVVVLTTST PEGSYSPASN SGAFAFGVNG LVSSSLMFLL FCFFMF

Arabidopsis Description

Uncharacterized GPI-anchored protein At5g19250 [Source:UniProtKB/Swiss-Prot;Acc:P59833]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.