Factsheet for TraesCS3B01G574300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G514100.1	Wheat	mitochondrion	99.27	99.27
TraesCS3A01G506200.1	Wheat	mitochondrion	99.09	99.09
HORVU0Hr1G007360.2	Barley	mitochondrion	98.91	98.91
Os10t0567400-01	Rice	mitochondrion	85.64	87.06
EES04263	Sorghum	cytosol	83.82	85.06
Zm00001d011819_P001	Maize	plastid	83.64	84.87
Zm00001d042026_P001	Maize	cytosol	74.36	80.67
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	76.36	77.49
VIT_18s0001g02700.t01	Wine grape	cytosol	68.36	72.59
KRH64672	Soybean	plastid	69.09	71.7
PGSC0003DMT400002345	Potato	plastid	68.91	70.84
KRH53240	Soybean	plastid	68.18	70.75
Solyc11g012850.1.1	Tomato	plastid	68.55	70.47
GSMUA_Achr6P18880_001	Banana	mitochondrion, plastid	69.09	70.37
GSMUA_Achr6P25590_001	Banana	plastid	69.82	69.95
KRH16353	Soybean	cytosol, golgi, plastid	67.82	69.85
CDY36339	Canola	plastid	66.36	69.66
KRH18716	Soybean	golgi	67.27	69.55
Bra036948.1-P	Field mustard	plastid	67.45	69.48
PGSC0003DMT400045302	Potato	plastid	67.45	69.35
CDY63862	Canola	plastid	66.91	69.3
CDY14980	Canola	plastid	67.27	69.29
Solyc06g060310.2.1	Tomato	golgi	67.09	68.97
AT1G44446.1	Thale cress	plastid	67.09	68.84
Zm00001d004531_P001	Maize	extracellular, plastid	24.0	48.0
TraesCS6B01G386400.1	Wheat	plastid	16.55	16.79
TraesCS5B01G465000.1	Wheat	golgi	14.18	14.69
TraesCS4B01G311100.1	Wheat	golgi	13.82	14.53
TraesCS7B01G038300.1	Wheat	golgi	13.09	13.79
TraesCS7B01G038100.1	Wheat	mitochondrion	11.45	12.83
TraesCS5B01G464800.1	Wheat	cytosol	5.45	10.34

Protein Annotations

Gene3D:2.102.10.10	MapMan:7.12.6.6.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0009706
GO:GO:0009987	GO:GO:0010277	GO:GO:0015995	GO:GO:0016020	GO:GO:0016491	GO:GO:0042651
GO:GO:0051537	GO:GO:0055114	InterPro:IPR017941	InterPro:IPR036922	PFAM:PF00355	PFAM:PF08417
ScanProsite:PS00570	PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF19	InterPro:PaO	InterPro:Rieske_2Fe-2S
InterPro:Rieske_2Fe-2S_sf	InterPro:Ring-hydroxy_dOase_2Fe2S_BS	SUPFAM:SSF50022	SUPFAM:SSF55961	EnsemblPlantsGene:TraesCS3B01G574300	EnsemblPlants:TraesCS3B01G574300.1
TIGR:cd04337	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:804666626..804671611

Molecular Weight (calculated)

62089.5 Da

IEP (calculated)

7.248

GRAVY (calculated)

-0.312

Length

550 amino acids

Sequence
(BLAST)

001: MTTVASLSLV PHLLLKPSLR CLSRKGVGRY GGIKVYAVLR DDSADYLKDN HHWEALFHVD DPGPRVPIEK GQYLEAKQAL DVVRFDIQYC DWRARQDLLT
101: IMVLHNKVVE VLNPLARDFK SVGNLRKDLD GLQEELAKAH NQLYLSESRV SSALDKLAQM ETVVNERLLS DGSAFANTAD CASLDPSTSL DTTTSTSSTV
201: RVGAQKPKRR SLNISGPVKP YSANLKNFWY PVAFSSDLKD DTMVPMDCFE EQWVIFRGKD KRPGCVQNTC AHRACPLDLG SVNEGRITCP YHGWEYSTDG
301: KCEKMPSTKM LNVRIRALPC FEQEGMVWIW PGDDTPTPTI PSLLPPSGFT IHAEIVMELP VEHGLLLDNL LDLAHAPFTH TSTFAKGWSV PSFVKFLTPT
401: SGLQGYWDPY PIDMEFRPPC MVLSTIGISK PGKLEGKSTQ QCATHLHQLH VCLPSSTNKT RLLYRMSLDF APWMKHMPFM HLLWSHFAEK VLNEDLRLVL
501: GQQDRMNNGA NVWNWPVSYD KLGIRYRLWR DAVERGVDRL PFSNEIESGS

Best Arabidopsis Sequence Match ( AT1G44446.1 )
(BLAST)

001: MNAAVFSPSA LSLPISFSKT RSSFLSRKKG VKGEFRVFAV FGDESGLVEK KSQWRPLFDV EDPRSKAPPY KGKFLDVNQA IEVARFDIQY LDWRARQDLL
101: TIMILHDKVV DVLNPLAREY KSIGTVKKEL AGLQEELSKA HQQVHISEAR VSTALDKLAH MEELVNDRLL PGRVVTELDK PSSSTTASAV ELDREKTNTG
201: AKSLNVSGPV PPYSPHLKNF WYPVAFTADL KHDTMVPIEC FEQPWVIFRG EDGKPGCVRN TCAHRACPLD LGTVNEGRIQ CPYHGWEYST DGECKKMPST
301: KLLKVKIKSL PCLEQEGMIW IWPGDEPPAP ILPSLQPPSG FLIHAELVMD LPVEHGLLLD NLLDLAHAPF THTSTFAKGW SVPSLVKFLT PTSGLQGYWD
401: PYPIDMEFKP PCIVLSTIGI SKPGKLEGKS TQQCATHLHQ LHVCLPSSKN KTRLLYRMSL DFAPILKNLP FMEHLWRHFA EQVLNEDLRL VLGQQERMLN
501: GANIWNLPVA YDKLGVRYRL WRNAVDRGDD KLPFSG

Arabidopsis Description

CAOCH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6L1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.