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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G506200.1 Wheat mitochondrion 99.82 99.82
HORVU0Hr1G007360.2 Barley mitochondrion 99.64 99.64
TraesCS3B01G574300.1 Wheat mitochondrion 99.27 99.27
Os10t0567400-01 Rice mitochondrion 86.36 87.8
EES04263 Sorghum cytosol 84.36 85.61
Zm00001d011819_P001 Maize plastid 84.0 85.24
Zm00001d042026_P001 Maize cytosol 74.73 81.07
Os10t0567100-01 Rice peroxisome, plasma membrane, plastid 76.73 77.86
VIT_18s0001g02700.t01 Wine grape cytosol 68.73 72.97
KRH64672 Soybean plastid 69.27 71.89
PGSC0003DMT400002345 Potato plastid 69.27 71.22
KRH53240 Soybean plastid 68.36 70.94
Solyc11g012850.1.1 Tomato plastid 68.91 70.84
GSMUA_Achr6P18880_001 Banana mitochondrion, plastid 69.09 70.37
GSMUA_Achr6P25590_001 Banana plastid 70.18 70.31
CDY36339 Canola plastid 66.73 70.04
KRH16353 Soybean cytosol, golgi, plastid 68.0 70.04
Bra036948.1-P Field mustard plastid 67.82 69.85
KRH18716 Soybean golgi 67.45 69.74
PGSC0003DMT400045302 Potato plastid 67.82 69.72
CDY14980 Canola plastid 67.64 69.66
CDY63862 Canola plastid 67.09 69.49
Solyc06g060310.2.1 Tomato golgi 67.45 69.35
AT1G44446.1 Thale cress plastid 67.45 69.22
Zm00001d004531_P001 Maize extracellular, plastid 24.0 48.0
TraesCS6D01G336000.1 Wheat golgi 16.0 16.24
TraesCS4D01G309000.1 Wheat mitochondrion 14.0 14.53
TraesCS5D01G466800.3 Wheat mitochondrion, plasma membrane, plastid 14.0 14.45
TraesCS7D01G137200.1 Wheat golgi 13.09 13.79
TraesCS5D01G466600.1 Wheat mitochondrion, plasma membrane, plastid 12.55 13.48
Protein Annotations
Gene3D:2.102.10.10MapMan:7.12.6.6.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005506GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009579GO:GO:0009706
GO:GO:0009987GO:GO:0010277GO:GO:0015995GO:GO:0016020GO:GO:0016491GO:GO:0042651
GO:GO:0051537GO:GO:0055114InterPro:IPR017941InterPro:IPR036922PFAM:PF00355PFAM:PF08417
ScanProsite:PS00570PFscan:PS51296PANTHER:PTHR21266PANTHER:PTHR21266:SF19InterPro:PaOInterPro:Rieske_2Fe-2S
InterPro:Rieske_2Fe-2S_sfInterPro:Ring-hydroxy_dOase_2Fe2S_BSSUPFAM:SSF50022SUPFAM:SSF55961EnsemblPlantsGene:TraesCS3D01G514100EnsemblPlants:TraesCS3D01G514100.1
TIGR:cd04337SEG:seg::::
Description
No Description!
Coordinates
chr3D:+:598010183..598013510
Molecular Weight (calculated)
62105.5 Da
IEP (calculated)
7.397
GRAVY (calculated)
-0.309
Length
550 amino acids
Sequence
(BLAST)
001: MTTVASLSLV PHLLIKPSFR CLSRKGVGRY GGIKVYAVLR DDSADYLKDN HHWEALFHVD DPGPRVPIEK GQYLEAKQAL DVVRFDIQYC DWRARQDLLT
101: IMVLHNKVVE VLNPLARDFK SVGNLRKDLD GLQEELAKAH NQLYLSESRV SSALDKLAQM ETVVNERLLS DGSAFANTAD CASLDPSTSL DTTTSTSSTV
201: RVGAKKPKRR SLNISGPVKP YSANLKNFWY PVAFSSDLKD DTMVPIDCFE EQWVIFRGKD KRPGCVQNTC AHRACPLDLG SVNEGRITCP YHGWEYSTDG
301: KCEKMPSTKM LNVRIRALPC FEQEGMVWIW PGDDTPTPTI PSLLPPSGFT IHAEIVMELP VEHGLLLDNL LDLAHAPFTH TSTFAKGWSV PSFVKFLTPT
401: SGLQGYWDPY PIDMEFRPPC MVLSTIGISK PGKLEGKSTQ QCATHLHQLH VCLPSSTNKT RLLYRMSLDF APWMKHMPFM HLLWSHFAEK VLNEDLRLVL
501: GQQDRMNNGA NVWNWPVSYD KLGIRYRLWR DAVERGVDRL PFSNEIESGS
Best Arabidopsis Sequence Match ( AT1G44446.1 )
(BLAST)
001: MNAAVFSPSA LSLPISFSKT RSSFLSRKKG VKGEFRVFAV FGDESGLVEK KSQWRPLFDV EDPRSKAPPY KGKFLDVNQA IEVARFDIQY LDWRARQDLL
101: TIMILHDKVV DVLNPLAREY KSIGTVKKEL AGLQEELSKA HQQVHISEAR VSTALDKLAH MEELVNDRLL PGRVVTELDK PSSSTTASAV ELDREKTNTG
201: AKSLNVSGPV PPYSPHLKNF WYPVAFTADL KHDTMVPIEC FEQPWVIFRG EDGKPGCVRN TCAHRACPLD LGTVNEGRIQ CPYHGWEYST DGECKKMPST
301: KLLKVKIKSL PCLEQEGMIW IWPGDEPPAP ILPSLQPPSG FLIHAELVMD LPVEHGLLLD NLLDLAHAPF THTSTFAKGW SVPSLVKFLT PTSGLQGYWD
401: PYPIDMEFKP PCIVLSTIGI SKPGKLEGKS TQQCATHLHQ LHVCLPSSKN KTRLLYRMSL DFAPILKNLP FMEHLWRHFA EQVLNEDLRL VLGQQERMLN
501: GANIWNLPVA YDKLGVRYRL WRNAVDRGDD KLPFSG
Arabidopsis Description
CAOCH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6L1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.