Factsheet for Zm00001d042026_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04263	Sorghum	cytosol	91.72	85.79
Zm00001d011819_P001	Maize	plastid	89.94	84.13
Os10t0567400-01	Rice	mitochondrion	86.59	81.15
TraesCS3D01G514100.1	Wheat	mitochondrion	81.07	74.73
HORVU0Hr1G007360.2	Barley	mitochondrion	81.07	74.73
TraesCS3A01G506200.1	Wheat	mitochondrion	80.87	74.55
Os10t0567100-01	Rice	peroxisome, plasma membrane, plastid	79.68	74.54
TraesCS3B01G574300.1	Wheat	mitochondrion	80.67	74.36
VIT_18s0001g02700.t01	Wine grape	cytosol	73.77	72.2
KRH64672	Soybean	plastid	73.57	70.38
GSMUA_Achr6P18880_001	Banana	mitochondrion, plastid	73.96	69.44
PGSC0003DMT400002345	Potato	plastid	73.18	69.35
Solyc11g012850.1.1	Tomato	plastid	73.18	69.35
KRH18716	Soybean	golgi	72.39	68.98
Solyc06g060310.2.1	Tomato	golgi	72.58	68.78
KRH53240	Soybean	plastid	71.79	68.68
PGSC0003DMT400045302	Potato	plastid	72.39	68.6
KRH16353	Soybean	cytosol, golgi, plastid	72.19	68.54
CDY63862	Canola	plastid	71.2	67.98
GSMUA_Achr6P25590_001	Banana	plastid	73.57	67.94
CDY36339	Canola	plastid	70.22	67.94
Bra036948.1-P	Field mustard	plastid	71.4	67.79
CDY14980	Canola	plastid	71.4	67.79
AT1G44446.1	Thale cress	plastid	71.2	67.35
Zm00001d004531_P001	Maize	extracellular, plastid	26.04	48.0
Zm00001d002582_P001	Maize	peroxisome	8.28	19.63
Zm00001d018358_P001	Maize	plastid	16.57	15.61
Zm00001d027656_P001	Maize	plastid	15.98	15.58
Zm00001d034523_P001	Maize	plastid	15.19	14.67
Zm00001d011533_P001	Maize	plastid	10.26	12.94
Zm00001d035045_P001	Maize	plastid	3.75	12.34

Protein Annotations

Gene3D:2.102.10.10	MapMan:7.12.6.6.1	UniProt:A0A1D6N0K8	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0010277	GO:GO:0016491
GO:GO:0016705	GO:GO:0051537	GO:GO:0055114	InterPro:IPR017941	InterPro:IPR036922	ProteinID:ONM34322.1
PFAM:PF00355	PFAM:PF08417	ScanProsite:PS00570	PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF19
InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	InterPro:Ring-hydroxy_dOase_2Fe2S_BS	SUPFAM:SSF50022	SUPFAM:SSF55961
UniParc:UPI000844C2C2	EnsemblPlantsGene:Zm00001d042026	EnsemblPlants:Zm00001d042026_P001	EnsemblPlants:Zm00001d042026_T001	SEG:seg	:

Description

Chlorophyllide a oxygenase chloroplastic

Coordinates

chr3:+:147731588..147734168

Molecular Weight (calculated)

56981.5 Da

IEP (calculated)

7.532

GRAVY (calculated)

-0.320

Length

507 amino acids

Sequence
(BLAST)

001: MPMLGRCVQD VGRYGGIKVY AVLREDGAEF ARNNNLEALF QVDDPGPRAP VKKFLDVNEA LEVVRFDIQY CDWRARQDLL TIMLLHSKVV EVLNPLAREF
101: KSIGTLRKEL AELQQELEKA HNQVHLSEAR VSSALDKLAH METLVSAPST AEPPTSSSLS ATASSTARVR AKNKQPRRRL DVSGPVKPYN PSLKNFWYPV
201: AFSSDLKAPD TMVPIDCFEE QWVIFRGKDG RPGCVQNTCA HRACPLHLGS VNEGRIQCPY HGWEYSTDGK CEKMPSTKML DVRIQSLPCF EQEGMVWIWP
301: GDDPPKATIP SLLPPSGFTV HAEIVMELPV EHGLLLDNLL DLAHAPFTHT STFAKGWSVP SLVKFLTPAS GLQGYWDPYP IDMEFRPPCM VLSTIGISKP
401: GKLQGKSTRQ CSTHLHQLHV CLPSSRNKTR LLYRMSLDFA PWLKHVLNED LRLVLGQQEG MIDGANVWNW PVSYDKLGIR YRLWRDAVER GADDRLPFSS
501: TQAESLS

Best Arabidopsis Sequence Match ( AT1G44446.1 )
(BLAST)

001: MNAAVFSPSA LSLPISFSKT RSSFLSRKKG VKGEFRVFAV FGDESGLVEK KSQWRPLFDV EDPRSKAPPY KGKFLDVNQA IEVARFDIQY LDWRARQDLL
101: TIMILHDKVV DVLNPLAREY KSIGTVKKEL AGLQEELSKA HQQVHISEAR VSTALDKLAH MEELVNDRLL PGRVVTELDK PSSSTTASAV ELDREKTNTG
201: AKSLNVSGPV PPYSPHLKNF WYPVAFTADL KHDTMVPIEC FEQPWVIFRG EDGKPGCVRN TCAHRACPLD LGTVNEGRIQ CPYHGWEYST DGECKKMPST
301: KLLKVKIKSL PCLEQEGMIW IWPGDEPPAP ILPSLQPPSG FLIHAELVMD LPVEHGLLLD NLLDLAHAPF THTSTFAKGW SVPSLVKFLT PTSGLQGYWD
401: PYPIDMEFKP PCIVLSTIGI SKPGKLEGKS TQQCATHLHQ LHVCLPSSKN KTRLLYRMSL DFAPILKNLP FMEHLWRHFA EQVLNEDLRL VLGQQERMLN
501: GANIWNLPVA YDKLGVRYRL WRNAVDRGDD KLPFSG

Arabidopsis Description

CAOCH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6L1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.