Factsheet for TraesCS7B01G038100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G038300.1	Wheat	golgi	90.83	85.44
TraesCS7D01G137200.1	Wheat	golgi	89.41	84.1
HORVU7Hr1G028370.3	Barley	mitochondrion, peroxisome, plasma membrane	88.8	78.28
TraesCS7A01G137000.1	Wheat	plastid	88.59	76.18
TraesCS5B01G464800.1	Wheat	cytosol	40.33	68.28
Os03t0805600-00	Rice	extracellular, mitochondrion	26.27	62.93
TraesCS5B01G465000.1	Wheat	golgi	67.01	61.96
Zm00001d034523_P001	Maize	plastid	65.58	61.33
EER93253	Sorghum	plastid	64.97	60.76
KXG37317	Sorghum	plastid	60.9	56.74
Os03t0805700-00	Rice	mitochondrion	59.47	54.89
Solyc04g039870.1.1	Tomato	cytosol, peroxisome, plastid	14.87	54.48
Zm00001d002582_P001	Maize	peroxisome	21.38	49.07
Os03t0805900-00	Rice	plastid	27.29	47.86
VIT_06s0004g00620.t01	Wine grape	cytosol, peroxisome, plasma membrane	44.6	47.3
GSMUA_Achr2P12380_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	41.34	46.45
PGSC0003DMT400007678	Potato	cytosol, peroxisome, plasma membrane	21.18	45.02
KRH42827	Soybean	mitochondrion	13.03	44.44
VIT_06s0004g00610.t01	Wine grape	cytosol, plastid	45.82	43.02
Zm00001d035045_P001	Maize	plastid	13.24	42.21
CDX89405	Canola	plastid	45.62	41.95
Bra013907.1-P	Field mustard	plastid	45.62	41.95
KRH58922	Soybean	plastid	45.01	41.78
Os03t0806300-00	Rice	peroxisome	48.68	41.64
CDX94430	Canola	plastid	45.21	41.5
KRH42828	Soybean	plastid	44.4	41.05
VIT_06s0004g00660.t01	Wine grape	cytosol	6.52	40.51
PGSC0003DMT400027602	Potato	plastid	44.4	40.15
AT4G25650.2	Thale cress	plastid	45.21	39.71
VIT_06s0004g00630.t01	Wine grape	cytosol	8.96	39.64
Solyc04g040160.2.1	Tomato	plastid	42.97	38.79
TraesCS4B01G311100.1	Wheat	golgi	29.94	28.11
Zm00001d011533_P001	Maize	plastid	20.57	25.12
TraesCS6B01G386400.1	Wheat	plastid	23.22	21.03
KRH05339	Soybean	cytosol	5.7	20.29
TraesCS3B01G574300.1	Wheat	mitochondrion	12.83	11.45

Protein Annotations

Gene3D:2.102.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010277	GO:GO:0016491	GO:GO:0051537	GO:GO:0055114	InterPro:IPR017941
InterPro:IPR036922	PFAM:PF00355	PFAM:PF08417	PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF38
InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022	SUPFAM:SSF55961	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS7B01G038100	EnsemblPlants:TraesCS7B01G038100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:+:37077456..37091336

Molecular Weight (calculated)

54565.7 Da

IEP (calculated)

9.840

GRAVY (calculated)

-0.205

Length

491 amino acids

Sequence
(BLAST)

001: MDPLRLLLPR AQAQPLLPLP DGVPAPSVRP RLVPRRRARR HRNGAARMLP ASAVASESPW TEQEPASGEK EERFNWLDQW YPFAPVEDLD PGAPRGKMVL
101: GIRVVAWYDR GAGEWRVFDD ACPHRLAPLS EGRIDDKGRL QCVYHEWCFD GRGACKFIPQ APALGPPVHT NRKACVASYP CVVQNRSCGS TRAPGRSTGT
201: YALRIKREGK SLFRPSHVPY AHKGLLLASP GLVEYDKEGG VPMAVKVEDS SVNGFASSQG PGYSNFVAPC TYYGSPASKK SEKNKPHIML VFIIVPVAPG
301: RSRVMWAFPR NFGLWLHKIT PRWFDHIGVN AILDSDMYLL HIEERNFAKA GIENWQKSVY VPTSSDGTVV AFRNWFRRYC KFQVGWAAPT VDQLPATPTK
401: DKLMDRYWSH VAQCTSCSAA LKAMKALEVA LQVASIAVVG LLAVAKGTLL TSVAQRAVVV SAAVLCFAAS RWLADFIQKN FYFEDYVHAY K

Best Arabidopsis Sequence Match ( AT3G44880.1 )
(BLAST)

001: MSVVLLSSTS ATITKSQSKK IPFLSPTTKF PLKVSISPSR SKLFHNPLRV AAPPSVPTSD STEEKRIEEE YGGDKEEEGS EFKWRDHWYP VSLVEDLDPN
101: VPTPFQLLGR DLVLWFDRND QKWAAFDDLC PHRLAPLSEG RLDENGHLQC SYHGWSFGGC GSCTRIPQAA TSGPEARAVK SPRACAIKFP TMVSQGLLFV
201: WPDENGWDRA NSIEPPRLPD DFDKPEFSTV TIQRDLFYGY DTLMENVSDP SHIDFAHHKV TGRRDRAKPL PFKVESSGPW GFQGANDDSP RITAKFVAPC
301: YSMNKIELDA KLPIVGNQKW VIWICSFNIP MAPGKTRSIV CSARNFFQFS VPGPAWWQVV PRWYEHWTSN LVYDGDMIVL QGQEKVFLAK SMESPDYDVN
401: KQYTKLTFTP TQADRFVLAF RNWLRRHGKS QPEWFGSTPS NQPLPSTVLT KRQMLDRFDQ HTQVCSSCKG AYNSFQILKK FLVGATVFWA ATAGVPSDVQ
501: IRLVLAGLSL ISAASAYALH EQEKNFVFRD YVHSEIE

Arabidopsis Description

PAOPheophorbide a oxygenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.