Factsheet for HORVU7Hr1G028370.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plasma membrane

Predictor Summary:

mitochondrion 2
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plasma membrane
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G038300.1	Wheat	golgi	87.25	93.1
TraesCS7D01G137200.1	Wheat	golgi	86.71	92.53
TraesCS7A01G137000.1	Wheat	plastid	91.2	88.97
TraesCS7B01G038100.1	Wheat	mitochondrion	78.28	88.8
Zm00001d034523_P001	Maize	plastid	64.45	68.38
EER93253	Sorghum	plastid	63.55	67.43
Zm00001d002582_P001	Maize	peroxisome	25.67	66.82
HORVU5Hr1G109470.1	Barley	plastid	66.79	65.61
KXG37317	Sorghum	plastid	57.99	61.29
Os03t0805700-00	Rice	mitochondrion	58.35	61.09
Os03t0805600-00	Rice	extracellular, mitochondrion	22.44	60.98
Solyc04g039870.1.1	Tomato	cytosol, peroxisome, plastid	14.0	58.21
Os03t0805900-00	Rice	plastid	28.73	57.14
PGSC0003DMT400007678	Potato	cytosol, peroxisome, plasma membrane	22.08	53.25
VIT_06s0004g00620.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.45	52.27
GSMUA_Achr2P12380_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	40.22	51.26
KRH58922	Soybean	plastid	45.42	47.83
VIT_06s0004g00610.t01	Wine grape	cytosol, plastid	44.88	47.8
Os03t0806300-00	Rice	peroxisome	49.19	47.74
Bra013907.1-P	Field mustard	plastid	45.06	47.0
CDX89405	Canola	plastid	45.06	47.0
KRH42827	Soybean	mitochondrion	12.03	46.53
CDX94430	Canola	plastid	44.52	46.36
KRH42828	Soybean	plastid	44.17	46.33
PGSC0003DMT400027602	Potato	plastid	43.27	44.38
AT4G25650.2	Thale cress	plastid	44.52	44.36
Solyc04g040160.2.1	Tomato	plastid	42.19	43.2
VIT_06s0004g00660.t01	Wine grape	cytosol	5.92	41.77
VIT_06s0004g00630.t01	Wine grape	cytosol	8.26	41.44
Zm00001d035045_P001	Maize	plastid	11.13	40.26
HORVU4Hr1G079260.2	Barley	peroxisome	28.01	31.64
HORVU4Hr1G079330.1	Barley	plastid	30.34	31.53
Zm00001d011533_P001	Maize	plastid	22.44	31.09
KRH05339	Soybean	cytosol	5.57	22.46
HORVU6Hr1G084510.1	Barley	plastid	22.26	21.79
HORVU0Hr1G007360.2	Barley	mitochondrion	12.21	12.36

Protein Annotations

Gene3D:2.102.10.10	Gene3D:3.30.530.90	MapMan:35.1	UniProt:A0A287VV75	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010277	GO:GO:0016491	GO:GO:0051537
GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G028370	EnsemblPlants:HORVU7Hr1G028370.3	InterPro:IPR017941	InterPro:IPR036922	PFAM:PF00355
PFAM:PF08417	PFscan:PS51296	PANTHER:PTHR21266	PANTHER:PTHR21266:SF38	InterPro:PaO	InterPro:Rieske_2Fe-2S
InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022	SUPFAM:SSF55961	UniParc:UPI000B487E4B	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:-:51814676..51816782

Molecular Weight (calculated)

62058.8 Da

IEP (calculated)

9.111

GRAVY (calculated)

-0.134

Length

557 amino acids

Sequence
(BLAST)

001: VAADKFYSHP LLTARRFFHL SSLPVSTHAA VDRPLDATGD MDPLRLLLPL AQAQPLLPLP TGVPAPRSLV RPRLRRRNGA ARMLPALAVA SKSPWTEQEP
101: ASGEKEERFD WLDQWYPFSP VEDLDPGAPH GKMVLGIRVV AWYDRGAGEW RVFDDACPHR LAPLSEGRID DKGRLQCVYH GWCFDGRGAC KFIPQAPALG
201: PPVHTNSKAC VPSYPCVVQN KILWFYPRAG AEHKDVLQRK RPPFIPEIDD PSFVTSFLVR DMPYGYDVLA ENLMDPSHVP YAHKGLLRGL PRLVDPGRLE
301: YDKEGGVPMA VKVEESSVNG FASSQGPGYS NFVAPCTYYG SPASKKSEKN KPHIMLVFII VPVAPGRSRV MWAFPRNFGL WLAKITPRWF DHIGVNAILD
401: SDMYLLHIEE RNFAKAGIEN WQKSVYVPTS SDGTVVAFRN WFRKYCRFQV GWAAPTVDQL PATPTKDKLM DRYWSHVAQC ASCSAALKAM KALEVALQVA
501: SVAVVGLLAV AKGTLLTSVA QRAAVVSVAV LCFAASRWLA DFIQKNFYFE DYVHAYK

Best Arabidopsis Sequence Match ( AT2G24820.1 )
(BLAST)

001: MAVPFLSSSL QLTPTSPILF TKVTPTPIIH NHRSTCTIPT KPRLRLLRRS AVAGTAVSDQ TEGGGDVLLN PEEEKRVEVA DYDWTEEWYP LYLTKNVPED
101: APLGLTVYDR QIVLYKDGEG TLRCYEDRCP HRLAKLSEGQ LIDGRLECLY HGWQFEGEGK CVKIPQLPAS AKIPKAACVK TYEVKDSQGV VWVWMSTKTP
201: PNPEKLPWFE NFARPGFFDI STTHELPYDH SILLENLMDP AHVPISHDRT DFTAKREDAQ PLVFEVTERS NRGFAGTWGR EKEGGKGSNL LRFDAPCVLQ
301: NNREFEGKDG VKNYFSGLFL CRPTGQGKSM LIVRFGVTKR SPLVSVLPQW FWHQNACKVF EQDMGFLSSQ NEVLMKEKVP TKDLYLNLKS SDTWVAEYRK
401: WMDKVGHGMP YHFGHRTISL PKVPPVVEHA PAGLIAALSA SYPAKGGIGT MHAPNLANRY FRHIIHCRSC SNVIKSFELW KNILSATAVA LTALAILVVS
501: RQWKAVLLGS AALCSAAAYT CLRAINLNTN NFIRTHRRL

Arabidopsis Description

TIC55Protein TIC 55, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SK50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.