Factsheet for HORVU5Hr1G109470.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G465000.1	Wheat	golgi	89.42	95.48
TraesCS5A01G456000.1	Wheat	plasma membrane, plastid	89.07	95.1
TraesCS5D01G466800.3	Wheat	mitochondrion, plasma membrane, plastid	89.24	94.93
Zm00001d034523_P001	Maize	plastid	67.9	73.33
Zm00001d002582_P001	Maize	peroxisome	27.34	72.43
EER93253	Sorghum	plastid	66.14	71.43
Os03t0805600-00	Rice	extracellular, mitochondrion	24.69	68.29
Os03t0805700-00	Rice	mitochondrion	64.02	68.23
HORVU7Hr1G028370.3	Barley	mitochondrion, peroxisome, plasma membrane	65.61	66.79
KXG37317	Sorghum	plastid	58.91	63.38
Os03t0805900-00	Rice	plastid	30.51	61.79
Solyc04g039870.1.1	Tomato	cytosol, peroxisome, plastid	13.4	56.72
GSMUA_Achr2P12380_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	41.45	53.78
VIT_06s0004g00620.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.5	52.05
PGSC0003DMT400007678	Potato	cytosol, peroxisome, plasma membrane	21.16	51.95
Os03t0806300-00	Rice	peroxisome	52.38	51.74
KRH58922	Soybean	plastid	47.44	50.85
VIT_06s0004g00610.t01	Wine grape	cytosol, plastid	46.03	49.9
KRH42828	Soybean	plastid	46.38	49.53
Bra013907.1-P	Field mustard	plastid	45.33	48.13
CDX89405	Canola	plastid	45.33	48.13
VIT_06s0004g00660.t01	Wine grape	cytosol	6.7	48.1
CDX94430	Canola	plastid	44.97	47.66
AT4G25650.2	Thale cress	plastid	45.33	45.98
KRH42827	Soybean	mitochondrion	11.64	45.83
PGSC0003DMT400027602	Potato	plastid	42.33	44.2
Solyc04g040160.2.1	Tomato	plastid	41.45	43.2
Zm00001d035045_P001	Maize	plastid	11.64	42.86
VIT_06s0004g00630.t01	Wine grape	cytosol	7.58	38.74
Zm00001d011533_P001	Maize	plastid	24.16	34.08
HORVU4Hr1G079330.1	Barley	plastid	28.04	29.66
HORVU4Hr1G079260.2	Barley	peroxisome	25.22	29.01
KRH05339	Soybean	cytosol	5.82	23.91
HORVU6Hr1G084510.1	Barley	plastid	23.63	23.55
HORVU0Hr1G007360.2	Barley	mitochondrion	13.4	13.82

Protein Annotations

Gene3D:2.102.10.10	Gene3D:3.30.530.90	MapMan:35.1	UniProt:A0A287SP77	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0010277	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0051537	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G109470	EnsemblPlants:HORVU5Hr1G109470.1
InterPro:IPR017941	InterPro:IPR036922	PFAM:PF00355	PFAM:PF08417	PFscan:PS51296	PANTHER:PTHR21266
PANTHER:PTHR21266:SF38	InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022	SUPFAM:SSF55961
TMHMM:TMhelix	UniParc:UPI000B464307	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:630049593..630052312

Molecular Weight (calculated)

61524.0 Da

IEP (calculated)

9.026

GRAVY (calculated)

-0.199

Length

567 amino acids

Sequence
(BLAST)

001: AHRSPTLXXX XXXXXXXXXX XSSPPAVGRR GIGRRAMDPL SLLLVPRALT SLPLPLRAAA PATSTARPAA PAPRRWRQRA RLSPPVSAVA AEAPSAPSPF
101: GGEEKAEEAG SFDWLDQWYP LAPVCDLDPG APHGKTVLGL RVVAWYDRAV DEWRVFDDAC PHRLAPLSEG RIDDKGRLQC VYHGWCFDGR GSCQFIPQAP
201: ALGPPVHKNS KACVASYPSV VQNNILWFYP RADAQHQDVL QRKRPPFIPE IDDPSFVTVY GVRDLPYGYD VLVENLMDPA HVPYAHKGLM GKLRKKEDPG
301: RVEFDVEGGG PVKMKIAEAD IAGFLSEQDN SGYFRYVAPC TFYGSPLPKE EEGEEKKKKK PPQFMLVFMC VPVSPGKSRV IWAFPRNIGV WLDKVIPRWY
401: YHIGQNAILD SDIYLLHIEE RNFAAAGVEN WQKAVYVPTS SDNMVIAFRN WFRKHCKSQV GWAAPTIGQL PETPTKDKLM ERYWSHVAQC RSCSTALKTM
501: KALEVALQVA SVAVVGFLAV AKGTLVTSVV QRVAVVTLAV LCFAASRWLA SFIEKNFYFQ DYVHAYK

Best Arabidopsis Sequence Match ( AT4G25650.1 )
(BLAST)

001: MEAALAACAL PSLRILNTKP RFRCSFSNPS LPISPNSLIT RKSSRFTTAV SSPPSSSAAT STNSPPEPEA LFEPGSDKFD WYANWYPVMP ICDLDKKVPH
101: GKKVMGIDLV VWWDRNEKQW KVMDDTCPHR LAPLSDGRID QWGRLQCVYH GWCFNGSGDC KLIPQAPPDG PPVHTFKQAC VAVYPSTVQH EIIWFWPNSD
201: PKYKNIIETN KPPYIPELED PSFTKLMGNR DIPYGYDVLV ENLMDPAHVP YAHYGLMRFP KPKEKIDREG GKPLEINVKK LDNKGFFSKQ EWGYSNFIAP
301: CVYRSSTDPL PEQEHEYPAP AASDKAALSK RRLSLIFICI PVSPGRSRLI WTFPRNFGVF IDKIVPRWVF HIGQNTILDS DLHLLHVEER KILERGPENW
401: QKACFIPTKS DANVVTFRRW FNKYSEARVD WRGKFDPFLL PPTPPREQLF DRYWSHVENC SSCKKAHKYL NALEVILQIA SVAMIGVMAV LKQTTMSNVA
501: RIAVLVAAVL SFAASKWLSH FIYKTFHYHD YNHAVV

Arabidopsis Description

PTC52Protochlorophyllide-dependent translocon component 52, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W496]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.