Factsheet for HORVU4Hr1G079330.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G311100.1	Wheat	golgi	93.1	95.41
TraesCS4D01G309000.1	Wheat	mitochondrion	94.22	95.28
TraesCS4A01G411000.1	Wheat	plastid	93.66	94.01
HORVU4Hr1G079260.2	Barley	peroxisome	84.14	91.48
Os03t0146400-01	Rice	plastid	83.96	85.07
EER95507	Sorghum	plastid	82.84	84.73
Zm00001d027656_P001	Maize	plastid	81.53	84.04
VIT_06s0061g00790.t01	Wine grape	plastid	69.03	68.65
GSMUA_Achr4P25150_001	Banana	nucleus	70.15	67.99
Solyc11g066440.1.1	Tomato	plastid	67.91	67.78
CDY29727	Canola	plastid	67.35	67.6
Bra037607.1-P	Field mustard	plastid	67.35	67.35
KRH30552	Soybean	plastid	68.47	67.34
AT3G44880.1	Thale cress	plastid	66.98	66.85
PGSC0003DMT400001216	Potato	plastid	67.72	66.12
KRH25120	Soybean	plastid	67.91	64.65
CDY20340	Canola	plastid	67.54	63.29
HORVU7Hr1G028370.3	Barley	mitochondrion, peroxisome, plasma membrane	31.53	30.34
HORVU5Hr1G109470.1	Barley	plastid	29.66	28.04
HORVU6Hr1G084510.1	Barley	plastid	24.07	22.67
HORVU0Hr1G007360.2	Barley	mitochondrion	14.18	13.82

Protein Annotations

Gene3D:2.102.10.10	MapMan:7.12.6.7.5	EMBL:AK353593	EMBL:AK365037	UniProt:F2CPP1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0010277
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0051537	GO:GO:0055114	EnsemblPlantsGene:HORVU4Hr1G079330
EnsemblPlants:HORVU4Hr1G079330.1	InterPro:IPR017941	InterPro:IPR036922	PFAM:PF00355	PFAM:PF08417	PFscan:PS51296
PANTHER:PTHR21266	PANTHER:PTHR21266:SF24	InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022
SUPFAM:SSF55961	TMHMM:TMhelix	UniParc:UPI0002004432	SEG:seg	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CPP1]

Coordinates

chrchr4H:+:611815171..611818868

Molecular Weight (calculated)

59827.1 Da

IEP (calculated)

8.529

GRAVY (calculated)

-0.338

Length

536 amino acids

Sequence
(BLAST)

001: MPAVAMPTAS LTLLSPRHRP SLLLPASRPC SSGLRLRPRR GRGRVGSTRL RVAAPPSVPG EAERAEDPST SASASPGSPE ERFVWRDHWY PVSLVEDLDP
101: RVPTPFQLLN RDLVIWNDPN SGDWVALDDR CPHRLAPLSE GRIDETGGLQ CSYHGWSFDG SGACTRIPQA AAEGPEARAV RSPRACATKF PTLLSQGLLF
201: VWPDENGWDK AKATKPPMLP KEFDDPAFST VTIQRDLFYG YDTLMENVSD PSHIEFAHHK VTGRRDRAKP LPFKMESSGA WGYSGANTGN PRITATFEAP
301: CYALNKIEID TKLPIVGDQK WVIWICSFNI PMAPGKTRSI VCSARNFFQF TMPGKAWWQL VPRWYEHWTS NLVYDGDMIV LQGQEKVFLS ASKESSADVN
401: QQYTKLTFTP TQADRFVLAF RAWLRKFGNS QPDWYGSPTQ DALPSTVLSK REMLDRYEQH TLKCSSCRGA HKAFQTLQKV FMGATVVFGV TSGIPADVQL
501: RILLGAGALI SAALAYVFYD RQKHFVFVDY VHADID

Best Arabidopsis Sequence Match ( AT3G44880.1 )
(BLAST)

001: MSVVLLSSTS ATITKSQSKK IPFLSPTTKF PLKVSISPSR SKLFHNPLRV AAPPSVPTSD STEEKRIEEE YGGDKEEEGS EFKWRDHWYP VSLVEDLDPN
101: VPTPFQLLGR DLVLWFDRND QKWAAFDDLC PHRLAPLSEG RLDENGHLQC SYHGWSFGGC GSCTRIPQAA TSGPEARAVK SPRACAIKFP TMVSQGLLFV
201: WPDENGWDRA NSIEPPRLPD DFDKPEFSTV TIQRDLFYGY DTLMENVSDP SHIDFAHHKV TGRRDRAKPL PFKVESSGPW GFQGANDDSP RITAKFVAPC
301: YSMNKIELDA KLPIVGNQKW VIWICSFNIP MAPGKTRSIV CSARNFFQFS VPGPAWWQVV PRWYEHWTSN LVYDGDMIVL QGQEKVFLAK SMESPDYDVN
401: KQYTKLTFTP TQADRFVLAF RNWLRRHGKS QPEWFGSTPS NQPLPSTVLT KRQMLDRFDQ HTQVCSSCKG AYNSFQILKK FLVGATVFWA ATAGVPSDVQ
501: IRLVLAGLSL ISAASAYALH EQEKNFVFRD YVHSEIE

Arabidopsis Description

PAOPheophorbide a oxygenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.