Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g066440.1.1 | Tomato | plastid | 93.81 | 95.9 |
| VIT_06s0061g00790.t01 | Wine grape | plastid | 70.13 | 71.43 |
| KRH30552 | Soybean | plastid | 70.13 | 70.64 |
| CDY29727 | Canola | plastid | 68.67 | 70.6 |
| Bra037607.1-P | Field mustard | plastid | 68.85 | 70.52 |
| AT3G44880.1 | Thale cress | plastid | 68.85 | 70.39 |
| TraesCS4B01G311100.1 | Wheat | golgi | 66.67 | 69.98 |
| HORVU4Hr1G079260.2 | Barley | peroxisome | 62.84 | 69.98 |
| EER95507 | Sorghum | plastid | 66.48 | 69.66 |
| Zm00001d027656_P001 | Maize | plastid | 65.21 | 68.85 |
| TraesCS4D01G309000.1 | Wheat | mitochondrion | 65.94 | 68.3 |
| TraesCS4A01G411000.1 | Wheat | plastid | 66.3 | 68.16 |
| KRH25120 | Soybean | plastid | 69.76 | 68.03 |
| Os03t0146400-01 | Rice | plastid | 65.39 | 67.86 |
| HORVU4Hr1G079330.1 | Barley | plastid | 66.12 | 67.72 |
| CDY20340 | Canola | plastid | 68.85 | 66.08 |
| GSMUA_Achr4P25150_001 | Banana | nucleus | 64.3 | 63.83 |
| PGSC0003DMT400007678 | Potato | cytosol, peroxisome, plasma membrane | 14.21 | 33.77 |
| PGSC0003DMT400027602 | Potato | plastid | 27.69 | 27.99 |
| PGSC0003DMT400075266 | Potato | plastid | 22.95 | 22.95 |
| PGSC0003DMT400045302 | Potato | plastid | 14.03 | 14.39 |
| PGSC0003DMT400002345 | Potato | plastid | 13.48 | 13.83 |
Protein Annotations
| EntrezGene:102579316 | Gene3D:2.102.10.10 | MapMan:7.12.6.7.5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010277 | GO:GO:0016491 | GO:GO:0051537 | GO:GO:0055114 |
| InterPro:IPR017941 | InterPro:IPR036922 | UniProt:M0ZI36 | PFAM:PF00355 | PFAM:PF08417 | EnsemblPlantsGene:PGSC0003DMG400000457 |
| PGSC:PGSC0003DMG400000457 | EnsemblPlants:PGSC0003DMT400001216 | PFscan:PS51296 | PANTHER:PTHR21266 | PANTHER:PTHR21266:SF24 | InterPro:PaO |
| InterPro:Rieske_2Fe-2S | InterPro:Rieske_2Fe-2S_sf | SUPFAM:SSF50022 | SUPFAM:SSF55961 | UniParc:UPI0002950FDD | RefSeq:XP_006349043.1 |
| SEG:seg | : | : | : | : | : |
Description
Lethal leaf spot 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400000457]
Coordinates
chr11:-:39251984..39258971
Molecular Weight (calculated)
62243.8 Da
IEP (calculated)
6.825
GRAVY (calculated)
-0.406
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSLLVLSP LPTPQILSIS SSLHSSLPSI PFKPHNFLRI RRKKNRPISS PFRVAAPPTT TPFSATEEEE EEQNPDSKSS DIEDTQNDEQ DSSSKFSWRD
101: HWYPVSLVED LDPSIPTPFQ LLNRDIVIWF DKSGSQWVAL DDKCPHRLAP LSEGRLDENG DLQCSYHGWS FNGCGSCTRI PQAASQGPEA KAFQSPRACA
201: TRFPIMVSQG LLFVWPDENG WERAQATKPP MLPEDFDKPE FATVTIQRDL FYGYDTLMEN VSDPSHIDFA HHKVTGRRDR AKPLPFKMEA SGPWGFAGAN
301: NDKPKITAKF VAPCYSMNKI EIDTKLPIVG DQKWVIWICS FNVPMAPGKT RSIVCSARNF FQFTVPGPAW WQVFPRWQEH WTSNKVYDGD MIVLQGQEKV
401: FLSKSKENGT DVNKEYTKLT FTPTQADRFV LAFRNWLRRH GNSQPEWFGS TDDQSLPSTV LSKRQMMDRF EQHTLKCSSC KNAYYTFEKL QKLLIGAVVI
501: CCATAGIPAE FNLRIILGSL AIISAGLAYV IHELQKNFIF VDYVHAEID
101: HWYPVSLVED LDPSIPTPFQ LLNRDIVIWF DKSGSQWVAL DDKCPHRLAP LSEGRLDENG DLQCSYHGWS FNGCGSCTRI PQAASQGPEA KAFQSPRACA
201: TRFPIMVSQG LLFVWPDENG WERAQATKPP MLPEDFDKPE FATVTIQRDL FYGYDTLMEN VSDPSHIDFA HHKVTGRRDR AKPLPFKMEA SGPWGFAGAN
301: NDKPKITAKF VAPCYSMNKI EIDTKLPIVG DQKWVIWICS FNVPMAPGKT RSIVCSARNF FQFTVPGPAW WQVFPRWQEH WTSNKVYDGD MIVLQGQEKV
401: FLSKSKENGT DVNKEYTKLT FTPTQADRFV LAFRNWLRRH GNSQPEWFGS TDDQSLPSTV LSKRQMMDRF EQHTLKCSSC KNAYYTFEKL QKLLIGAVVI
501: CCATAGIPAE FNLRIILGSL AIISAGLAYV IHELQKNFIF VDYVHAEID
001: MSVVLLSSTS ATITKSQSKK IPFLSPTTKF PLKVSISPSR SKLFHNPLRV AAPPSVPTSD STEEKRIEEE YGGDKEEEGS EFKWRDHWYP VSLVEDLDPN
101: VPTPFQLLGR DLVLWFDRND QKWAAFDDLC PHRLAPLSEG RLDENGHLQC SYHGWSFGGC GSCTRIPQAA TSGPEARAVK SPRACAIKFP TMVSQGLLFV
201: WPDENGWDRA NSIEPPRLPD DFDKPEFSTV TIQRDLFYGY DTLMENVSDP SHIDFAHHKV TGRRDRAKPL PFKVESSGPW GFQGANDDSP RITAKFVAPC
301: YSMNKIELDA KLPIVGNQKW VIWICSFNIP MAPGKTRSIV CSARNFFQFS VPGPAWWQVV PRWYEHWTSN LVYDGDMIVL QGQEKVFLAK SMESPDYDVN
401: KQYTKLTFTP TQADRFVLAF RNWLRRHGKS QPEWFGSTPS NQPLPSTVLT KRQMLDRFDQ HTQVCSSCKG AYNSFQILKK FLVGATVFWA ATAGVPSDVQ
501: IRLVLAGLSL ISAASAYALH EQEKNFVFRD YVHSEIE
101: VPTPFQLLGR DLVLWFDRND QKWAAFDDLC PHRLAPLSEG RLDENGHLQC SYHGWSFGGC GSCTRIPQAA TSGPEARAVK SPRACAIKFP TMVSQGLLFV
201: WPDENGWDRA NSIEPPRLPD DFDKPEFSTV TIQRDLFYGY DTLMENVSDP SHIDFAHHKV TGRRDRAKPL PFKVESSGPW GFQGANDDSP RITAKFVAPC
301: YSMNKIELDA KLPIVGNQKW VIWICSFNIP MAPGKTRSIV CSARNFFQFS VPGPAWWQVV PRWYEHWTSN LVYDGDMIVL QGQEKVFLAK SMESPDYDVN
401: KQYTKLTFTP TQADRFVLAF RNWLRRHGKS QPEWFGSTPS NQPLPSTVLT KRQMLDRFDQ HTQVCSSCKG AYNSFQILKK FLVGATVFWA ATAGVPSDVQ
501: IRLVLAGLSL ISAASAYALH EQEKNFVFRD YVHSEIE
Arabidopsis Description
PAOPheophorbide a oxygenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.