Factsheet for HORVU6Hr1G084510.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G386400.1	Wheat	plastid	91.39	95.94
TraesCS6A01G353700.1	Wheat	plastid	91.04	95.22
TraesCS6D01G336000.1	Wheat	golgi	90.33	94.83
EES05942	Sorghum	plastid	77.86	82.34
Zm00001d018358_P001	Maize	plastid	77.33	81.78
Os02t0792800-01	Rice	plastid	77.15	81.45
VIT_04s0008g07020.t01	Wine grape	plastid	60.81	63.6
KRH52304	Soybean	plastid	59.23	62.41
Bra000547.1-P	Field mustard	plastid	59.05	62.11
CDY38515	Canola	plastid	59.05	62.11
CDY38513	Canola	plastid	59.05	62.11
CDX83228	Canola	plastid	59.05	62.11
AT2G24820.1	Thale cress	plastid	58.52	61.78
GSMUA_Achr4P20520_001	Banana	plastid	54.31	60.83
KRH61640	Soybean	plasma membrane, plastid	60.63	60.0
Solyc12g096550.1.1	Tomato	plastid	57.29	59.71
PGSC0003DMT400075266	Potato	plastid	57.29	59.38
CDY38514	Canola	plastid	21.97	53.19
HORVU4Hr1G079260.2	Barley	peroxisome	20.91	24.14
HORVU4Hr1G079330.1	Barley	plastid	22.67	24.07
HORVU5Hr1G109470.1	Barley	plastid	23.55	23.63
HORVU7Hr1G028370.3	Barley	mitochondrion, peroxisome, plasma membrane	21.79	22.26
HORVU0Hr1G007360.2	Barley	mitochondrion	15.64	16.18

Protein Annotations

Gene3D:2.102.10.10	MapMan:23.1.3.5.2	UniProt:A0A287V0B8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009941	GO:GO:0010277	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0045036	GO:GO:0051537	GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G084510
EnsemblPlants:HORVU6Hr1G084510.1	InterPro:IPR017941	InterPro:IPR036922	PFAM:PF00355	PFAM:PF08417	PFscan:PS51296
PANTHER:PTHR21266	PANTHER:PTHR21266:SF29	InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022
SUPFAM:SSF55961	TMHMM:TMhelix	UniParc:UPI000B48837A	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:+:554869961..554874445

Molecular Weight (calculated)

62822.9 Da

IEP (calculated)

9.087

GRAVY (calculated)

-0.310

Length

569 amino acids

Sequence
(BLAST)

001: ANPRAHYSLP IRAIDRASSV RQPNQTRPDM TPPPPPATAL PRPSLLLAVS SAALQISSAA TSPARGVRWQ GVGGRSERSR AVGWCRAAAV EEAGAQEDGV
101: LLPKDGSEAA GRYDWREEWY PLYLSKEVPD DAALPLTVFD RQLVLYRDAD GVLRCHEDRC PHRLAKLSEG QLVDGKLECL YHGWQFDGQG KCVKIPQLPE
201: GAKIPRNACA RNYEVRDSQG VVWVWMSPAS PPDAKKLPWF EPYARPGFTD LSTVHELPYD HSILLENLMD PAHVPISHDR TDWTAKREDA QPLAFDVAER
301: TARGFAGHWW RERAPHLRNL LRFEAPCVLS NTLEFVDKDG KEQCFSAQFL CRPAGQGKSM LLVRFGSTAS SPLVKVLPKW YLHQNACKVF EQDMGFLSSQ
401: NEVLLREKVP TKELYLNLRS SDTWVAEYRR WMDRAGHGMP YYFGHSTISP PPVPAVVEQA PAGAAAGISA SFPAKGGAGT QHAPNPTNRY FRHVVHCKGC
501: RDTVNRYTAL KKAFVVLAAV AAAAAVLAAT RQWKAVLLGA AAVLAAASYA CGSVVSLITT NFIRTHRRL

Best Arabidopsis Sequence Match ( AT2G24820.1 )
(BLAST)

001: MAVPFLSSSL QLTPTSPILF TKVTPTPIIH NHRSTCTIPT KPRLRLLRRS AVAGTAVSDQ TEGGGDVLLN PEEEKRVEVA DYDWTEEWYP LYLTKNVPED
101: APLGLTVYDR QIVLYKDGEG TLRCYEDRCP HRLAKLSEGQ LIDGRLECLY HGWQFEGEGK CVKIPQLPAS AKIPKAACVK TYEVKDSQGV VWVWMSTKTP
201: PNPEKLPWFE NFARPGFFDI STTHELPYDH SILLENLMDP AHVPISHDRT DFTAKREDAQ PLVFEVTERS NRGFAGTWGR EKEGGKGSNL LRFDAPCVLQ
301: NNREFEGKDG VKNYFSGLFL CRPTGQGKSM LIVRFGVTKR SPLVSVLPQW FWHQNACKVF EQDMGFLSSQ NEVLMKEKVP TKDLYLNLKS SDTWVAEYRK
401: WMDKVGHGMP YHFGHRTISL PKVPPVVEHA PAGLIAALSA SYPAKGGIGT MHAPNLANRY FRHIIHCRSC SNVIKSFELW KNILSATAVA LTALAILVVS
501: RQWKAVLLGS AALCSAAAYT CLRAINLNTN NFIRTHRRL

Arabidopsis Description

TIC55Protein TIC 55, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SK50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.