Factsheet for TraesCS7A01G137000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G137200.1	Wheat	golgi	88.97	97.32
TraesCS7B01G038300.1	Wheat	golgi	85.11	93.1
HORVU7Hr1G028370.3	Barley	mitochondrion, peroxisome, plasma membrane	88.97	91.2
TraesCS7B01G038100.1	Wheat	mitochondrion	76.18	88.59
TraesCS5A01G456000.1	Wheat	plasma membrane, plastid	63.75	68.55
Zm00001d034523_P001	Maize	plastid	62.87	68.38
EER93253	Sorghum	plastid	62.17	67.62
Zm00001d002582_P001	Maize	peroxisome	25.22	67.29
TraesCS5A01G455800.1	Wheat	plastid	62.87	65.75
Os03t0805600-00	Rice	extracellular, mitochondrion	22.42	62.44
KXG37317	Sorghum	plastid	57.44	62.24
Os03t0805700-00	Rice	mitochondrion	56.74	60.9
Os03t0805900-00	Rice	plastid	28.55	58.21
Solyc04g039870.1.1	Tomato	cytosol, peroxisome, plastid	13.49	57.46
VIT_06s0004g00620.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.38	52.27
PGSC0003DMT400007678	Potato	cytosol, peroxisome, plasma membrane	21.02	51.95
GSMUA_Achr2P12380_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	38.18	49.89
Os03t0806300-00	Rice	peroxisome	47.46	47.21
KRH58922	Soybean	plastid	43.26	46.69
VIT_06s0004g00610.t01	Wine grape	cytosol, plastid	42.73	46.65
Bra013907.1-P	Field mustard	plastid	43.43	46.44
CDX89405	Canola	plastid	43.43	46.44
CDX94430	Canola	plastid	42.91	45.79
KRH42828	Soybean	plastid	42.03	45.2
KRH42827	Soybean	mitochondrion	11.21	44.44
PGSC0003DMT400027602	Potato	plastid	42.03	44.2
AT4G25650.2	Thale cress	plastid	42.73	43.65
VIT_06s0004g00660.t01	Wine grape	cytosol	5.95	43.04
Zm00001d035045_P001	Maize	plastid	11.56	42.86
Solyc04g040160.2.1	Tomato	plastid	40.81	42.83
VIT_06s0004g00630.t01	Wine grape	cytosol	7.88	40.54
Zm00001d011533_P001	Maize	plastid	22.24	31.59
TraesCS4A01G411000.1	Wheat	plastid	28.9	30.9
TraesCS6A01G353700.1	Wheat	plastid	22.07	23.16
KRH05339	Soybean	cytosol	5.25	21.74
TraesCS3A01G506200.1	Wheat	mitochondrion	12.61	13.09

Protein Annotations

Gene3D:2.102.10.10	Gene3D:3.30.530.90	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010277	GO:GO:0016491	GO:GO:0051537	GO:GO:0055114
InterPro:IPR017941	InterPro:IPR036922	PFAM:PF00355	PFAM:PF08417	PFscan:PS51296	PANTHER:PTHR21266
PANTHER:PTHR21266:SF38	InterPro:PaO	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	SUPFAM:SSF50022	SUPFAM:SSF55961
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G137000	EnsemblPlants:TraesCS7A01G137000.1	TIGR:cd03480	SEG:seg	:

Description

No Description!

Coordinates

chr7A:+:89833534..89835718

Molecular Weight (calculated)

63748.6 Da

IEP (calculated)

9.009

GRAVY (calculated)

-0.206

Length

571 amino acids

Sequence
(BLAST)

001: MSATRPSPVA SDKFYRQLPL TARRFFLSLV SSPPVSTHAV DRPLDATGDM DPLRLLLPRV QAQPLLPLPA GVPAPSVRPR LVPRRRARRH RNGAARMLPA
101: SAVASESPWT EQDPASGEKE ERFDWLDQWY PFAPVEDLDP GAPHGKMVLG IRVVAWYDRG AGEWRVFEDA CPHRLAPLSE GRIDDKGRLQ CVYHGWCFDG
201: RGACKFIPQA PALGPPVHTN SKACVASYPC VVQNKLLWFY PRAGPEHSDV LQRKRPPFIP EIDDPSFVTS FLIRDMPFGY DVLAENLMDP SHVPYAHKGL
301: FRGLPRLVDP GREEYDEEGG VPMAVQVEES SVNGYASSQG PGYSKFVAPC TYYGSPASKK SEKNKPHLMI VFIIVPVAPG RSRVMWAYPR NFGLWLHKIT
401: PRWFDHIGVN VVLDSDMYLL HLEERNFAKA GIENWQKSVY VPTTSDGTVV AFRNWFRKHC GFQVGWAAPT VDQLPPTPTK DKLMDRYWSH VAQCTSCSAA
501: LKAMKALEVA LQVASIAVVG LLAVAKGTLL TSVAQRAAVV SAAVLCFVAS RWLADFIQKK FYFEDYVHAY K

Best Arabidopsis Sequence Match ( AT3G44880.1 )
(BLAST)

001: MSVVLLSSTS ATITKSQSKK IPFLSPTTKF PLKVSISPSR SKLFHNPLRV AAPPSVPTSD STEEKRIEEE YGGDKEEEGS EFKWRDHWYP VSLVEDLDPN
101: VPTPFQLLGR DLVLWFDRND QKWAAFDDLC PHRLAPLSEG RLDENGHLQC SYHGWSFGGC GSCTRIPQAA TSGPEARAVK SPRACAIKFP TMVSQGLLFV
201: WPDENGWDRA NSIEPPRLPD DFDKPEFSTV TIQRDLFYGY DTLMENVSDP SHIDFAHHKV TGRRDRAKPL PFKVESSGPW GFQGANDDSP RITAKFVAPC
301: YSMNKIELDA KLPIVGNQKW VIWICSFNIP MAPGKTRSIV CSARNFFQFS VPGPAWWQVV PRWYEHWTSN LVYDGDMIVL QGQEKVFLAK SMESPDYDVN
401: KQYTKLTFTP TQADRFVLAF RNWLRRHGKS QPEWFGSTPS NQPLPSTVLT KRQMLDRFDQ HTQVCSSCKG AYNSFQILKK FLVGATVFWA ATAGVPSDVQ
501: IRLVLAGLSL ISAASAYALH EQEKNFVFRD YVHSEIE

Arabidopsis Description

PAOPheophorbide a oxygenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.