Factsheet for GSMUA_Achr8P11100_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012260	Potato	plastid	30.46	62.41
Os10t0507800-02	Rice	cytosol	60.55	61.11
HORVU1Hr1G046670.2	Barley	cytosol	59.45	60.0
TraesCS1B01G204300.1	Wheat	cytosol	59.27	59.81
TraesCS1D01G162900.1	Wheat	cytosol	59.27	59.81
EER91398	Sorghum	cytosol	59.08	59.63
TraesCS1A01G175900.1	Wheat	cytosol	59.08	59.63
VIT_02s0154g00550.t01	Wine grape	cytosol	58.72	59.59
Solyc08g078660.2.1	Tomato	nucleus	58.53	59.07
Zm00001d032505_P002	Maize	plasma membrane	58.17	58.7
KRH77367	Soybean	cytosol	55.96	56.48
KRH28073	Soybean	cytosol	54.31	56.27
AT2G35720.1	Thale cress	cytosol	53.03	53.72
CDY40444	Canola	nucleus	51.74	52.22
CDY65318	Canola	nucleus	51.74	52.22
Bra017300.1-P	Field mustard	nucleus	51.93	52.12

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.1	ncoils:Coil	InterPro:DnaJ-like_C11_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0007275
GO:GO:0008150	GO:GO:0009536	GO:GO:0009628	GO:GO:0009791	GO:GO:0010228	GO:GO:0055122
EnsemblPlantsGene:GSMUA_Achr8G11100_001	EnsemblPlants:GSMUA_Achr8P11100_001	EnsemblPlants:GSMUA_Achr8T11100_001	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
UniProt:M0TPG3	PFAM:PF00226	PFAM:PF11875	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR44914	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002949263	SEG:seg	:

Description

Chaperone protein dnaJ 13 [Source:GMGC_GENE;Acc:GSMUA_Achr8G11100_001]

Coordinates

chr8:+:7989124..8009150

Molecular Weight (calculated)

60654.8 Da

IEP (calculated)

9.487

GRAVY (calculated)

-0.379

Length

545 amino acids

Sequence
(BLAST)

001: MGSRSSEGNS QEEAGPHTEL YARLNVSPSA SAEEIRKAFL NLSGVAHPDK HLDPELKDAA TENFRQIVEA YDVLNNEEKR QIYDIYGMEG LKSGLELGPH
101: LNKVEELKEQ LEKLKRHKEQ EKVLAHGPAS MTLVAKLSLP SYLDGHGIIR RMQMYSEVQS HMSKRNMISV SGNFLVSGNR GDGYANVLLR HQVSPFAHVD
201: FMATAGLRSL IGLQASCQLS NHSKATSGLT VSLGDGSVNL SNTWTRQLSE TSFGDIQLVL GTESAITAGW KKKEEKTSAA GEVKFGTGYF GASAHYTHRF
301: SENSHCRIAG NIGSALYLEI GGGRRISDSS FVRLVYNIGI EGILWRFELH RGSQKLLIPV LLSRDLDPIV ATGAFMVPSS LYFLLKKFVL KPYYLRRQKQ
401: KALEKKEVSL NQIRKARDAA KKAQKLLQNV SNRKKNKEVE KDGLVITKAI YGNLRTARGT EEHLEVDDDV ASLILDVTLP LNFLVTNSRL ELHKGIKKSG
501: IMGFCDPCPG EPSQLLVEYT FKGKNYKVVV DDYDLLRIPN ETHRI

Best Arabidopsis Sequence Match ( AT2G35720.1 )
(BLAST)

001: MMGQEAAPTG PPNRELYALL NLSPEASDEE IRKAYRQWAQ VYHPDKIQSP QMKEVATENF QRICEAYEIL SDETKRLIYD LYGMEGLNSG LELGPRLSKA
101: DEIKEELERI KRRNEEAKKM AHFQPTGSIL FNLSVPHFLV GDGIMRGMVM ASQVQSQLSK DDAIAIGGNL AANEKSGGGV ATAILRRQIS PVSSIEFVAS
201: TGLQSLIGVQ TTRQLTIHST ATINISKSLS DGSINLTNTW TRQLSETSSG NIELALGMRS AITVGWKKRD ENVSAAGDFK IESGGLGASA RYTRKLSSKS
301: HGRIVGRIGS NALEIELGGG RQISEFSTVR MMYTVGLKGI FWKVELHRGS QKLIVPILLS AHLAPVFATG AFIVPTSLYF LLKKFVVKPY LLKREKQKAL
401: ENMEKTWGQV GEARARAEKA QQLLQTVATR KKNRQVETDG LIVTKALYGD PKAIERRNEG VEGLDSGVID VTVPMNFLVS DSGQLKLHEG VKKSGIMGFC
501: DPCPGQPKQL YIAYTYHSQP FEVIVGDYEE LSIPQEGQ

Arabidopsis Description

ATJ13Chaperone protein dnaJ 13 [Source:UniProtKB/Swiss-Prot;Acc:Q39079]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.