Factsheet for PGSC0003DMT400012260

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g078660.2.1	Tomato	nucleus	94.36	46.48
VIT_02s0154g00550.t01	Wine grape	cytosol	73.31	36.31
AT2G35720.1	Thale cress	cytosol	67.67	33.46
CDY65318	Canola	nucleus	66.92	32.96
CDY40444	Canola	nucleus	66.54	32.78
Bra017300.1-P	Field mustard	nucleus	66.54	32.6
KRH28073	Soybean	cytosol	63.91	32.32
KRH77367	Soybean	cytosol	65.04	32.04
EER91398	Sorghum	cytosol	62.78	30.93
TraesCS1A01G175900.1	Wheat	cytosol	62.78	30.93
Os10t0507800-02	Rice	cytosol	62.41	30.74
TraesCS1B01G204300.1	Wheat	cytosol	62.41	30.74
TraesCS1D01G162900.1	Wheat	cytosol	62.03	30.56
Zm00001d032505_P002	Maize	plasma membrane	62.03	30.56
GSMUA_Achr8P11100_001	Banana	cytosol	62.41	30.46
HORVU1Hr1G046670.2	Barley	cytosol	61.28	30.19

Protein Annotations

EnsemblPlants:PGSC0003DMT400012260	EnsemblPlantsGene:PGSC0003DMG400004811	GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0007275	GO:GO:0008150	GO:GO:0009536	GO:GO:0009628	GO:GO:0009791
GO:GO:0010228	GO:GO:0055122	InterPro:DnaJ-like_C11_C	ncoils:Coil	PANTHER:PTHR44914	PFAM:PF11875
PGSC:PGSC0003DMG400004811	UniParc:UPI0002951032	UniProt:M1A100	MapMan:35.1	:	:

Description

Chaperone protein dnaJ [Source:PGSC_GENE;Acc:PGSC0003DMG400004811]

Coordinates

chr8:+:52329433..52336080

Molecular Weight (calculated)

29750.2 Da

IEP (calculated)

10.104

GRAVY (calculated)

-0.209

Length

266 amino acids

Sequence
(BLAST)

001: MQLGTGSFGA TANYTHRFST KSHGRIAARI GSTALELELG GGRKISEFST IRMLYTVGIQ GIFWKFELHR GGQKLIVPVL LSRHLNPIFA TGAFVVPTSL
101: YFVLKRFVVK PFYLKREKQK ASENMDKTLV QVQEARTAAK KAQQLLQNVA NRKRSRQLET GGLVVTKALY GSRKALKNRN QIEEVKDEVA SQIIDVTLPL
201: NFLVSDSGQL KLHEGVKKSG IMGFCDPCPG ESKQLYVEYT FDGSNFEVIV DDLDELLIPQ ESHRIC

Best Arabidopsis Sequence Match ( AT2G35720.1 )
(BLAST)

001: MMGQEAAPTG PPNRELYALL NLSPEASDEE IRKAYRQWAQ VYHPDKIQSP QMKEVATENF QRICEAYEIL SDETKRLIYD LYGMEGLNSG LELGPRLSKA
101: DEIKEELERI KRRNEEAKKM AHFQPTGSIL FNLSVPHFLV GDGIMRGMVM ASQVQSQLSK DDAIAIGGNL AANEKSGGGV ATAILRRQIS PVSSIEFVAS
201: TGLQSLIGVQ TTRQLTIHST ATINISKSLS DGSINLTNTW TRQLSETSSG NIELALGMRS AITVGWKKRD ENVSAAGDFK IESGGLGASA RYTRKLSSKS
301: HGRIVGRIGS NALEIELGGG RQISEFSTVR MMYTVGLKGI FWKVELHRGS QKLIVPILLS AHLAPVFATG AFIVPTSLYF LLKKFVVKPY LLKREKQKAL
401: ENMEKTWGQV GEARARAEKA QQLLQTVATR KKNRQVETDG LIVTKALYGD PKAIERRNEG VEGLDSGVID VTVPMNFLVS DSGQLKLHEG VKKSGIMGFC
501: DPCPGQPKQL YIAYTYHSQP FEVIVGDYEE LSIPQEGQ

Arabidopsis Description

ATJ13Chaperone protein dnaJ 13 [Source:UniProtKB/Swiss-Prot;Acc:Q39079]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.