CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
endoplasmic reticulum 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28073	Soybean	cytosol	92.78	95.25
VIT_02s0154g00550.t01	Wine grape	cytosol	71.85	72.25
KRH00187	Soybean	cytosol	10.0	72.0
Solyc08g078660.2.1	Tomato	nucleus	69.26	69.26
PGSC0003DMT400012260	Potato	plastid	32.04	65.04
TraesCS1B01G204300.1	Wheat	cytosol	63.7	63.7
TraesCS1A01G175900.1	Wheat	cytosol	63.7	63.7
AT2G35720.1	Thale cress	cytosol	62.96	63.2
TraesCS1D01G162900.1	Wheat	cytosol	63.15	63.15
HORVU1Hr1G046670.2	Barley	cytosol	63.15	63.15
Os10t0507800-02	Rice	cytosol	62.59	62.59
EER91398	Sorghum	cytosol	61.67	61.67
Zm00001d032505_P002	Maize	plasma membrane	61.48	61.48
CDY40444	Canola	nucleus	61.11	61.11
Bra017300.1-P	Field mustard	nucleus	61.3	60.96
CDY65318	Canola	nucleus	60.93	60.93
GSMUA_Achr8P11100_001	Banana	cytosol	56.48	55.96

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100817782	MapMan:35.1	EMBL:ACUP02000669	ncoils:Coil	InterPro:DnaJ-like_C11_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_01G209800	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
UniProt:I1J9W3	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KRH77367	ProteinID:KRH77367
ProteinID:KRH77367.1	PFAM:PF00226	PFAM:PF11875	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR44914	SMART:SM00271	SUPFAM:SSF46565	TMHMM:TMhelix	UniParc:UPI0002337400	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:54132504..54141485

Molecular Weight (calculated)

59946.7 Da

IEP (calculated)

9.485

GRAVY (calculated)

-0.397

Length

540 amino acids

Sequence
(BLAST)

001: MDEPNEAQDN RELYALLNLS PEASDEEIRR AYRQWAQAYH PDKYQAPHMK DIATENFQRI CEAYEILSDP NKRQIYDIYG MEGLTSGLEL GPKLNGAEEI
101: KAELERLKRM KEREKMAAHF QPSGTIVANM SLPRYLDGNG MLRGMAMTSE IQSQLSKRNA VTIGGNLAVN GEEGGGAATA VFRHHLSEVS SVEVVASAGL
201: RALIGVQTTR NLSSHSAATM GIALSLKDGS LNLSNLWTRQ LSETASGHIE LALGPHSSVT VGWQKKDQRR SASGEVKFGT GSFETSVHYT HRFSPKSLGC
301: IVGRVGSSSL EVEVGGGRKL SKFSSVRWLY IIGIQGISWK FELYRGGQKL IIPILLTRHL NPVFATGAFV VPASLYFVLK KLFIKPYYLR RNKQKALEEK
401: EKTSAQVKEA RATAEKAQNL QQNVANRKRN KQLETGGLVI MRALYGNQRI LNNLKSSSET SFELTSEVID VTIPLNFLVN DSGQLKLHEG VKKSGIMGFC
501: DPCPGSPKDL YVEYVYAGNQ YRVWAGDYEE LQIPQGSHRI

Best Arabidopsis Sequence Match ( AT2G35720.1 )
(BLAST)

001: MMGQEAAPTG PPNRELYALL NLSPEASDEE IRKAYRQWAQ VYHPDKIQSP QMKEVATENF QRICEAYEIL SDETKRLIYD LYGMEGLNSG LELGPRLSKA
101: DEIKEELERI KRRNEEAKKM AHFQPTGSIL FNLSVPHFLV GDGIMRGMVM ASQVQSQLSK DDAIAIGGNL AANEKSGGGV ATAILRRQIS PVSSIEFVAS
201: TGLQSLIGVQ TTRQLTIHST ATINISKSLS DGSINLTNTW TRQLSETSSG NIELALGMRS AITVGWKKRD ENVSAAGDFK IESGGLGASA RYTRKLSSKS
301: HGRIVGRIGS NALEIELGGG RQISEFSTVR MMYTVGLKGI FWKVELHRGS QKLIVPILLS AHLAPVFATG AFIVPTSLYF LLKKFVVKPY LLKREKQKAL
401: ENMEKTWGQV GEARARAEKA QQLLQTVATR KKNRQVETDG LIVTKALYGD PKAIERRNEG VEGLDSGVID VTVPMNFLVS DSGQLKLHEG VKKSGIMGFC
501: DPCPGQPKQL YIAYTYHSQP FEVIVGDYEE LSIPQEGQ

Arabidopsis Description

ATJ13Chaperone protein dnaJ 13 [Source:UniProtKB/Swiss-Prot;Acc:Q39079]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.