CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77367	Soybean	cytosol	95.25	92.78
VIT_02s0154g00550.t01	Wine grape	cytosol	71.1	69.65
Solyc08g078660.2.1	Tomato	nucleus	68.82	67.04
PGSC0003DMT400012260	Potato	plastid	32.32	63.91
TraesCS1B01G204300.1	Wheat	cytosol	63.5	61.85
TraesCS1A01G175900.1	Wheat	cytosol	63.5	61.85
TraesCS1D01G162900.1	Wheat	cytosol	62.93	61.3
HORVU1Hr1G046670.2	Barley	cytosol	62.93	61.3
AT2G35720.1	Thale cress	cytosol	61.98	60.59
Os10t0507800-02	Rice	cytosol	61.79	60.19
EER91398	Sorghum	cytosol	61.6	60.0
Zm00001d032505_P002	Maize	plasma membrane	61.41	59.81
CDY40444	Canola	nucleus	60.08	58.52
Bra017300.1-P	Field mustard	nucleus	60.27	58.38
CDY65318	Canola	nucleus	59.51	57.96
KRH00187	Soybean	cytosol	7.79	54.67
GSMUA_Achr8P11100_001	Banana	cytosol	56.27	54.31

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.1	EMBL:ACUP02006741	ncoils:Coil	InterPro:DnaJ-like_C11_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_11G032400	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	UniProt:I1LGP7
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KRH28073	ProteinID:KRH28073	ProteinID:KRH28073.1
PFAM:PF00226	PFAM:PF11875	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44914
SMART:SM00271	SUPFAM:SSF46565	TMHMM:TMhelix	UniParc:UPI00023CDDB0	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:-:2365584..2374583

Molecular Weight (calculated)

58648.1 Da

IEP (calculated)

9.542

GRAVY (calculated)

-0.410

Length

526 amino acids

Sequence
(BLAST)

001: MDEPNEAQDH RELYALLNLS PEASDEEIRR AYRQWAQVYH PDKYQAPHMK DIATENFQRI CEAYEILSDP NKRQIYDIYG MEAEEIKAEL ERLKRMKERE
101: KVAAHFQSSG TILANMSLPR YLNGNGLLRG MAMTSEIQSQ LSKHNAVTIG GNLAVNGDEG GGAATAVFRH QLSEVSSVEV VASAGLRALI GVQTTRNLSS
201: HSAATMGIAM SLKDGSLNLS NLWTRQLSET ASGHIELTLG PHSSVTVGWQ KKERRRSASG EVKFGTGSFE TSVHYTHRFS PKSLGCIVGR VGSSSLEVEV
301: GGGRKLSKFS SVRWLYIIGI QGISWKFELY RGGQKLIIPI LLTRNLNPMF ATGAFVVPAS LYFVLKKLFI KPYYLRRNKQ KALEEEEKTS AQVKEARAAA
401: EKAQKLQQTV ANRKRNKQLE TGGLVIMRAL YGNQRIVNNL KSSSETSFES TSEVIDVTIP LNFLVNDSGQ LKLHEGVKKS GIMGFCDPYP GSPKELYVEY
501: VYAGNQYKVW AGDYEELQIP QGSHRI

Best Arabidopsis Sequence Match ( AT2G35720.1 )
(BLAST)

001: MMGQEAAPTG PPNRELYALL NLSPEASDEE IRKAYRQWAQ VYHPDKIQSP QMKEVATENF QRICEAYEIL SDETKRLIYD LYGMEGLNSG LELGPRLSKA
101: DEIKEELERI KRRNEEAKKM AHFQPTGSIL FNLSVPHFLV GDGIMRGMVM ASQVQSQLSK DDAIAIGGNL AANEKSGGGV ATAILRRQIS PVSSIEFVAS
201: TGLQSLIGVQ TTRQLTIHST ATINISKSLS DGSINLTNTW TRQLSETSSG NIELALGMRS AITVGWKKRD ENVSAAGDFK IESGGLGASA RYTRKLSSKS
301: HGRIVGRIGS NALEIELGGG RQISEFSTVR MMYTVGLKGI FWKVELHRGS QKLIVPILLS AHLAPVFATG AFIVPTSLYF LLKKFVVKPY LLKREKQKAL
401: ENMEKTWGQV GEARARAEKA QQLLQTVATR KKNRQVETDG LIVTKALYGD PKAIERRNEG VEGLDSGVID VTVPMNFLVS DSGQLKLHEG VKKSGIMGFC
501: DPCPGQPKQL YIAYTYHSQP FEVIVGDYEE LSIPQEGQ

Arabidopsis Description

ATJ13Chaperone protein dnaJ 13 [Source:UniProtKB/Swiss-Prot;Acc:Q39079]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.