Factsheet for HORVU1Hr1G046670.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G204300.1	Wheat	cytosol	97.04	97.04
TraesCS1A01G175900.1	Wheat	cytosol	96.67	96.67
TraesCS1D01G162900.1	Wheat	cytosol	96.67	96.67
Os10t0507800-02	Rice	cytosol	84.63	84.63
EER91398	Sorghum	cytosol	82.59	82.59
Zm00001d032505_P002	Maize	plasma membrane	81.67	81.67
VIT_02s0154g00550.t01	Wine grape	cytosol	65.56	65.92
Solyc08g078660.2.1	Tomato	nucleus	65.56	65.56
KRH77367	Soybean	cytosol	63.15	63.15
KRH28073	Soybean	cytosol	61.3	62.93
PGSC0003DMT400012260	Potato	plastid	30.19	61.28
GSMUA_Achr8P11100_001	Banana	cytosol	60.0	59.45
AT2G35720.1	Thale cress	cytosol	57.78	57.99
CDY40444	Canola	nucleus	55.93	55.93
Bra017300.1-P	Field mustard	nucleus	55.93	55.62
CDY65318	Canola	nucleus	55.19	55.19

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.1	UniProt:A0A287FES8	ncoils:Coil	InterPro:DnaJ-like_C11_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0007275	GO:GO:0008150	GO:GO:0009536	GO:GO:0009628	GO:GO:0009791	GO:GO:0010228
GO:GO:0016020	GO:GO:0016021	GO:GO:0055122	EnsemblPlantsGene:HORVU1Hr1G046670	EnsemblPlants:HORVU1Hr1G046670.2	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF11875	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PANTHER:PTHR44914	SMART:SM00271	SUPFAM:SSF46565	TMHMM:TMhelix	UniParc:UPI000B46E7BF
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:342218674..342227036

Molecular Weight (calculated)

60038.5 Da

IEP (calculated)

7.851

GRAVY (calculated)

-0.426

Length

540 amino acids

Sequence
(BLAST)

001: MAPEPEPEDG RELYALLHLS PESSDEEIRR AYRQFAQIYH PDKYQDPQMK DVATENFQRI RDAYEILSDE NKRQIYDIYG MEGLNSGLEL GPKLNKPEEI
101: KRQLEELRRR KEEEKVFFHA RSTGSILANI SLPQYLDGDG VMGGMGMSSE IELPVSKQNT VTVGGNLVVN GTNGSGAATA VLRHQLSSAS SIDFMATAGL
201: RSLIGVQTFR QISPNSTATS GLALSLRDGS VNLSNGWTRQ LSEDTVANIQ LVLGTESNIS VGWQKKDEKR SAAGEIKFGT NSFGASAHYT HRFSSKSHGR
301: VAGRVGSTAL DFEIGGGRRI SEFSTVRMLY NIGIQGVTWR FELNRAGQKL VIPVLLSTDF NALFVTGAFA IPSTLYFLLQ TYLVKPYYLR REKQKTLEKM
401: DSLSTQLTEA RQAAKKSQRL LEPVSNRKKN KQQESDGLVI TKALYGNHKK IKESSQLSEI DDNVASQVLD VTIPLNFLVT EAGQLKLHEG IKKSGIMGFY
501: DPCPGDPKLL LVEYLFHGQQ YKVMADDYGA LSIPQDIHQI

Best Arabidopsis Sequence Match ( AT2G35720.1 )
(BLAST)

001: MMGQEAAPTG PPNRELYALL NLSPEASDEE IRKAYRQWAQ VYHPDKIQSP QMKEVATENF QRICEAYEIL SDETKRLIYD LYGMEGLNSG LELGPRLSKA
101: DEIKEELERI KRRNEEAKKM AHFQPTGSIL FNLSVPHFLV GDGIMRGMVM ASQVQSQLSK DDAIAIGGNL AANEKSGGGV ATAILRRQIS PVSSIEFVAS
201: TGLQSLIGVQ TTRQLTIHST ATINISKSLS DGSINLTNTW TRQLSETSSG NIELALGMRS AITVGWKKRD ENVSAAGDFK IESGGLGASA RYTRKLSSKS
301: HGRIVGRIGS NALEIELGGG RQISEFSTVR MMYTVGLKGI FWKVELHRGS QKLIVPILLS AHLAPVFATG AFIVPTSLYF LLKKFVVKPY LLKREKQKAL
401: ENMEKTWGQV GEARARAEKA QQLLQTVATR KKNRQVETDG LIVTKALYGD PKAIERRNEG VEGLDSGVID VTVPMNFLVS DSGQLKLHEG VKKSGIMGFC
501: DPCPGQPKQL YIAYTYHSQP FEVIVGDYEE LSIPQEGQ

Arabidopsis Description

ATJ13Chaperone protein dnaJ 13 [Source:UniProtKB/Swiss-Prot;Acc:Q39079]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.