Factsheet for Zm00001d032505_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91398	Sorghum	cytosol	93.33	93.33
Os10t0507800-02	Rice	cytosol	83.52	83.52
TraesCS1B01G204300.1	Wheat	cytosol	82.41	82.41
TraesCS1A01G175900.1	Wheat	cytosol	82.04	82.04
HORVU1Hr1G046670.2	Barley	cytosol	81.67	81.67
TraesCS1D01G162900.1	Wheat	cytosol	81.67	81.67
VIT_02s0154g00550.t01	Wine grape	cytosol	65.56	65.92
Solyc08g078660.2.1	Tomato	nucleus	64.44	64.44
PGSC0003DMT400012260	Potato	plastid	30.56	62.03
KRH77367	Soybean	cytosol	61.48	61.48
KRH28073	Soybean	cytosol	59.81	61.41
AT2G35720.1	Thale cress	cytosol	59.63	59.85
CDY40444	Canola	nucleus	58.52	58.52
GSMUA_Achr8P11100_001	Banana	cytosol	58.7	58.17
Bra017300.1-P	Field mustard	nucleus	58.33	58.01
CDY65318	Canola	nucleus	57.78	57.78

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100282474	MapMan:35.1	UniProt:B4FMR7	EMBL:BT038405	ncoils:Coil
InterPro:DnaJ-like_C11_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000003	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0007275	GO:GO:0008150	GO:GO:0009536	GO:GO:0009628
GO:GO:0009791	GO:GO:0010228	GO:GO:0055122	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
ProteinID:ONM05224.1	PFAM:PF00226	PFAM:PF11875	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR44914	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI00017B6DCC	EnsemblPlantsGene:Zm00001d032505	EnsemblPlants:Zm00001d032505_P002
EnsemblPlants:Zm00001d032505_T002	SEG:seg	:	:	:	:

Description

Chaperone protein dnaJ 13

Coordinates

chr1:+:228773674..228781928

Molecular Weight (calculated)

60358.5 Da

IEP (calculated)

9.269

GRAVY (calculated)

-0.354

Length

540 amino acids

Sequence
(BLAST)

001: MASAPEPENG RELYALLHLS PDASSEEVRR AYRQFAQIYH PDKYQDPQMK DVATENFQRI CEAYEILSDD NKRQVYDIYG MEGLNSGLEL GPKLTKPEEI
101: KEQLERLRRR KEEEKLFKHA LPNGSIIANF SVPQYLNDGS IMRGMAMLSQ VELPVSKQNT VVVGGNLIVN GSAGSGAATT VLRHQLSPVS SIEFMATAGL
201: RSVIGGQMFR QISPHSTATS GLAVSLRDGS INLSNAWTRQ LSDNTVGNIQ LVLGDESSIS VGWQKKDEKR TATGEVKFGT NFFGASAHYT HRFSSKSHAR
301: IAGRVGSTIL DFEIGGGRRI SEFSTVRMMY NIGIQGVSWK FELHRAGQKL IIPVLLSTDL NPLFVTSAFA IPSTLYFLLQ TYVVKPYYLK REKQKTLEKM
401: EGLSTQLTEA RKAAEKAQKL LEPVSNRKKN RQLENNGLVI TKALYGSRQK IKMSSELNDI HNDMASQVFD VTIPLNFLVT EAGQLKLHDG IKKSGIMGFY
501: DPCPGDPKLL LVEYTFHGHK YKVMVDDYEA LLIPQDIHQF

Best Arabidopsis Sequence Match ( AT2G35720.1 )
(BLAST)

001: MMGQEAAPTG PPNRELYALL NLSPEASDEE IRKAYRQWAQ VYHPDKIQSP QMKEVATENF QRICEAYEIL SDETKRLIYD LYGMEGLNSG LELGPRLSKA
101: DEIKEELERI KRRNEEAKKM AHFQPTGSIL FNLSVPHFLV GDGIMRGMVM ASQVQSQLSK DDAIAIGGNL AANEKSGGGV ATAILRRQIS PVSSIEFVAS
201: TGLQSLIGVQ TTRQLTIHST ATINISKSLS DGSINLTNTW TRQLSETSSG NIELALGMRS AITVGWKKRD ENVSAAGDFK IESGGLGASA RYTRKLSSKS
301: HGRIVGRIGS NALEIELGGG RQISEFSTVR MMYTVGLKGI FWKVELHRGS QKLIVPILLS AHLAPVFATG AFIVPTSLYF LLKKFVVKPY LLKREKQKAL
401: ENMEKTWGQV GEARARAEKA QQLLQTVATR KKNRQVETDG LIVTKALYGD PKAIERRNEG VEGLDSGVID VTVPMNFLVS DSGQLKLHEG VKKSGIMGFC
501: DPCPGQPKQL YIAYTYHSQP FEVIVGDYEE LSIPQEGQ

Arabidopsis Description

ATJ13Chaperone protein dnaJ 13 [Source:UniProtKB/Swiss-Prot;Acc:Q39079]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.