Factsheet for TraesCS1B01G204300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G175900.1	Wheat	cytosol	99.26	99.26
TraesCS1D01G162900.1	Wheat	cytosol	99.26	99.26
HORVU1Hr1G046670.2	Barley	cytosol	97.04	97.04
Os10t0507800-02	Rice	cytosol	84.44	84.44
EER91398	Sorghum	cytosol	82.96	82.96
Zm00001d032505_P002	Maize	plasma membrane	82.41	82.41
VIT_02s0154g00550.t01	Wine grape	cytosol	66.3	66.67
Solyc08g078660.2.1	Tomato	nucleus	66.11	66.11
KRH77367	Soybean	cytosol	63.7	63.7
KRH28073	Soybean	cytosol	61.85	63.5
PGSC0003DMT400012260	Potato	plastid	30.74	62.41
GSMUA_Achr8P11100_001	Banana	cytosol	59.81	59.27
AT2G35720.1	Thale cress	cytosol	58.89	59.11
CDY40444	Canola	nucleus	57.22	57.22
Bra017300.1-P	Field mustard	nucleus	57.22	56.91
CDY65318	Canola	nucleus	56.3	56.3

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.1	ncoils:Coil	InterPro:DnaJ-like_C11_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0007275
GO:GO:0008150	GO:GO:0009536	GO:GO:0009628	GO:GO:0009791	GO:GO:0010228	GO:GO:0055122
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF11875	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44914	SMART:SM00271	SUPFAM:SSF46565	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS1B01G204300	EnsemblPlants:TraesCS1B01G204300.1	TIGR:cd06257	SEG:seg	:	:

Description

No Description!

Coordinates

chr1B:+:368405270..368413193

Molecular Weight (calculated)

59966.5 Da

IEP (calculated)

7.851

GRAVY (calculated)

-0.409

Length

540 amino acids

Sequence
(BLAST)

001: MAPEPEPEDG RELYALLHLS PESSDEEIRR AYRQFAQIYH PDKYQDAQMK DVATENFQRI RDAYEILSDE NKRQIYDIYG MEGLNSGLEL GPKLNKPEEI
101: KRQLEELRRR KEEEKLFVHA RSTGSILANI SVPQYLDGDG IMGGMGMSSE IELPVSKQNT VTVGGNLVVN GTTGSGAATA VLRHQLSSVS SIDFMATAGL
201: RSLIGVQTFR QISPNSTATS GIALSLRDGS VNLSNGWTRQ LSEDTVGNIQ LVLGTESNIS VGWQKKDEKR SAAGEIKFGT NSFGASAHYT HRFSSKSHGR
301: IAGRVGSTAL DFEIGGGRRI SEFSTVRMLY NIGIQGVTWK FELNRAGQKL VIPVLLSTDF NALFVTGAFA IPSTLYFLLQ TYVVKPYYLR REKQKTLEKM
401: DSLSTQLTEA RQAAKKSQRL LEPVSNRKKN KQQESDGLVI TKALYGNHKK VKESSQLSEI DDNVASQVLD VTIPLNFLVT EAGQLKLHEG IKKSGIMGFY
501: DPCPGDPKLL LVEYIFHGRQ YKVMADDYGA LSIPQDIHEI

Best Arabidopsis Sequence Match ( AT2G35720.1 )
(BLAST)

001: MMGQEAAPTG PPNRELYALL NLSPEASDEE IRKAYRQWAQ VYHPDKIQSP QMKEVATENF QRICEAYEIL SDETKRLIYD LYGMEGLNSG LELGPRLSKA
101: DEIKEELERI KRRNEEAKKM AHFQPTGSIL FNLSVPHFLV GDGIMRGMVM ASQVQSQLSK DDAIAIGGNL AANEKSGGGV ATAILRRQIS PVSSIEFVAS
201: TGLQSLIGVQ TTRQLTIHST ATINISKSLS DGSINLTNTW TRQLSETSSG NIELALGMRS AITVGWKKRD ENVSAAGDFK IESGGLGASA RYTRKLSSKS
301: HGRIVGRIGS NALEIELGGG RQISEFSTVR MMYTVGLKGI FWKVELHRGS QKLIVPILLS AHLAPVFATG AFIVPTSLYF LLKKFVVKPY LLKREKQKAL
401: ENMEKTWGQV GEARARAEKA QQLLQTVATR KKNRQVETDG LIVTKALYGD PKAIERRNEG VEGLDSGVID VTVPMNFLVS DSGQLKLHEG VKKSGIMGFC
501: DPCPGQPKQL YIAYTYHSQP FEVIVGDYEE LSIPQEGQ

Arabidopsis Description

ATJ13Chaperone protein dnaJ 13 [Source:UniProtKB/Swiss-Prot;Acc:Q39079]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.