Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G286200.6 | Wheat | nucleus | 90.64 | 92.21 |
| TraesCS2A01G287900.4 | Wheat | nucleus | 90.21 | 91.87 |
| TraesCS2B01G304600.1 | Wheat | nucleus | 90.21 | 91.87 |
| Zm00001d025278_P025 | Maize | nucleus | 63.51 | 59.94 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 62.23 | 58.44 |
| OQU81438 | Sorghum | plastid | 63.72 | 56.62 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 51.06 | 51.84 |
| GSMUA_Achr6P11050_001 | Banana | nucleus | 52.13 | 50.78 |
| GSMUA_Achr10P... | Banana | nucleus | 51.28 | 50.42 |
| GSMUA_Achr10P... | Banana | nucleus | 53.09 | 49.36 |
| HORVU1Hr1G000530.2 | Barley | nucleus | 28.94 | 45.87 |
| HORVU7Hr1G000370.12 | Barley | nucleus, plastid | 34.36 | 36.37 |
| HORVU6Hr1G025080.3 | Barley | mitochondrion | 5.32 | 29.24 |
| HORVU3Hr1G091930.1 | Barley | nucleus | 15.0 | 20.83 |
| HORVU5Hr1G081420.2 | Barley | mitochondrion | 6.06 | 16.57 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | UniProt:A0A287IDH8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | EnsemblPlantsGene:HORVU2Hr1G071240 | EnsemblPlants:HORVU2Hr1G071240.13 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:MEI2-like_RRM3 |
| InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 |
| PANTHER:PTHR44127 | PANTHER:PTHR44127:SF3 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI000B470ED2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:507109440..507117501
Molecular Weight (calculated)
104045.0 Da
IEP (calculated)
7.440
GRAVY (calculated)
-0.619
Length
940 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPYKLMDQK TPFGEHKLLG HQRHVNLPPT PWRADQDPLQ QHDSFSKPLA LFSNARKGHL NITQYENGLF SSSLPDIFDK KLRLTPKNGL VGQPAEKELN
101: HADDEPFELT QEIEAQVIGN LLPDDDDLLS GVLYNVGHPA RANNIDDIDD DIFSTGGGME LEADENNKLL KHNGGANTGQ TGLNGLPYGE NPSRTLFIRN
201: INANVEDTEL KLLFEQYGDI QTLYTAYKHH GLVIISYYDI RSAERAMKAL QSKPFRQWKL EIHYSIPKEN LLENDNNQGT LAVINLDQSV TNDDLRHIFG
301: GYGEIKAIHE TTQKGYHKSV EFFDIRAAEA ALYALNMREI AGKKIRLERC CPGDGKRLMR HRHPELEQEE YGACKLGNAS SLPSPYYGSV NMASMTSTGP
401: EHGISRVLRP RGQPPMHQFR EGVFLDVPSS TMQSISSPVR IATAVTHSNG SALGENGHSL GKSGQINGHL NYGFHGIGAF NPHSLPDFRN GQSNGISCNL
501: GAISPIGVKS NSRAAEGTES RHLYKVSSAN LGGHSSGHTE APGFSRTGSC PFHGHQVAWN NSNNSHHHSS SPMIWPNSGS FINNIPSRPP TQVHGISRTS
601: RMLENALPAN HHVGSAPAVN PSILDRRTGY AGEPMEAPSF HPGSAGSMGF SGSPHLHQLE LTSMFPQSGG NPAMSPAHIG ARSPQQRGHM FHGRGHIGPP
701: SSFDSLGERA RSRRNESCAN QSDNKRQYEL DIERIVCGED SRTTLMIKNI PNKYTSKMLL TAIDENHKGT YDFVYLPIDF KVNELFFVNS CCIVYRWFDI
801: TCIQGPNGAH VHFQNKCNVG YAFINMISPE HIVPFYKIFH GKRWEKFNSE KVASLAYARI QGRSSLIAHF QNSSLMNEDK RCRPILFHSD GPNAGDQEPF
901: PMGTHIRSRP GRSRVLSCEE SHRDTLSSSA NNWTPSNGGS
101: HADDEPFELT QEIEAQVIGN LLPDDDDLLS GVLYNVGHPA RANNIDDIDD DIFSTGGGME LEADENNKLL KHNGGANTGQ TGLNGLPYGE NPSRTLFIRN
201: INANVEDTEL KLLFEQYGDI QTLYTAYKHH GLVIISYYDI RSAERAMKAL QSKPFRQWKL EIHYSIPKEN LLENDNNQGT LAVINLDQSV TNDDLRHIFG
301: GYGEIKAIHE TTQKGYHKSV EFFDIRAAEA ALYALNMREI AGKKIRLERC CPGDGKRLMR HRHPELEQEE YGACKLGNAS SLPSPYYGSV NMASMTSTGP
401: EHGISRVLRP RGQPPMHQFR EGVFLDVPSS TMQSISSPVR IATAVTHSNG SALGENGHSL GKSGQINGHL NYGFHGIGAF NPHSLPDFRN GQSNGISCNL
501: GAISPIGVKS NSRAAEGTES RHLYKVSSAN LGGHSSGHTE APGFSRTGSC PFHGHQVAWN NSNNSHHHSS SPMIWPNSGS FINNIPSRPP TQVHGISRTS
601: RMLENALPAN HHVGSAPAVN PSILDRRTGY AGEPMEAPSF HPGSAGSMGF SGSPHLHQLE LTSMFPQSGG NPAMSPAHIG ARSPQQRGHM FHGRGHIGPP
701: SSFDSLGERA RSRRNESCAN QSDNKRQYEL DIERIVCGED SRTTLMIKNI PNKYTSKMLL TAIDENHKGT YDFVYLPIDF KVNELFFVNS CCIVYRWFDI
801: TCIQGPNGAH VHFQNKCNVG YAFINMISPE HIVPFYKIFH GKRWEKFNSE KVASLAYARI QGRSSLIAHF QNSSLMNEDK RCRPILFHSD GPNAGDQEPF
901: PMGTHIRSRP GRSRVLSCEE SHRDTLSSSA NNWTPSNGGS
001: MPSDIMEQRG VSTPSHFHED IHITSERQFG FMKTDMMPEN QGGRDRLSSM PKSSWTSESY QLKPQSSFSG SHPSGSPNAR NTTNGSQWES SLFSSSMSDL
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.