Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 75.96 | 76.67 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 67.36 | 70.19 |
| GSMUA_Achr10P... | Banana | nucleus | 66.74 | 63.7 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 56.58 | 54.55 |
| EES05145 | Sorghum | nucleus | 56.06 | 54.26 |
| TraesCS2D01G286200.6 | Wheat | nucleus | 51.19 | 53.46 |
| TraesCS2B01G304600.1 | Wheat | nucleus | 50.98 | 53.3 |
| TraesCS2A01G287900.4 | Wheat | nucleus | 50.88 | 53.2 |
| Zm00001d016606_P022 | Maize | nucleus | 55.96 | 52.48 |
| HORVU2Hr1G071240.13 | Barley | nucleus | 50.78 | 52.13 |
| Zm00001d050584_P034 | Maize | endoplasmic reticulum, nucleus | 54.09 | 49.53 |
| Zm00001d008781_P003 | Maize | nucleus | 9.53 | 49.2 |
| Zm00001d025278_P025 | Maize | nucleus | 48.6 | 47.09 |
| Zm00001d031675_P001 | Maize | nucleus | 7.15 | 46.94 |
| OQU81438 | Sorghum | plastid | 48.81 | 44.52 |
| GSMUA_Achr6P13670_001 | Banana | nucleus | 28.19 | 44.01 |
| Zm00001d048798_P001 | Maize | nucleus | 14.92 | 43.37 |
| Zm00001d007808_P002 | Maize | nucleus | 15.96 | 43.26 |
| GSMUA_Achr10P... | Banana | nucleus | 36.68 | 41.99 |
| Zm00001d013726_P001 | Maize | nucleus | 9.22 | 38.53 |
| GSMUA_Achr4P31220_001 | Banana | plastid | 35.13 | 37.67 |
| GSMUA_Achr11P... | Banana | cytosol | 4.97 | 30.0 |
| GSMUA_Achr2P20130_001 | Banana | nucleus | 35.03 | 27.52 |
| GSMUA_Achr3P03100_001 | Banana | nucleus | 37.51 | 27.26 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 8.29 | 27.03 |
| GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 38.34 | 26.91 |
| GSMUA_Achr7P02820_001 | Banana | cytosol, nucleus, plastid | 13.78 | 26.34 |
| GSMUA_Achr8P01280_001 | Banana | cytoskeleton, cytosol, nucleus | 15.34 | 25.78 |
| GSMUA_Achr8P32080_001 | Banana | nucleus | 15.75 | 22.0 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| EnsemblPlantsGene:GSMUA_Achr6G11050_001 | EnsemblPlants:GSMUA_Achr6P11050_001 | EnsemblPlants:GSMUA_Achr6T11050_001 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:M0T604 |
| InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF1 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI0002956094 | SEG:seg | : | : | : |
Description
AML1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G11050_001]
Coordinates
chr6:+:7353055..7362767
Molecular Weight (calculated)
106033.0 Da
IEP (calculated)
6.470
GRAVY (calculated)
-0.573
Length
965 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSPPDKHC EIKASSMECL ELPKSCNLKD QKTESNLEHH LMVPQRVTSI PPTSRLADHV SGFQSDMLSL PPLFGKGNIM DLSGPYENGL FSSSLSDILD
101: KKLRLSSRIV PFGQSVNSVN SNFGEDEPFE SMEEIEARTI GNLLPDDDDL FPGAAENIGY IHRPSNGNDI DDDIFYSGGG MELESDDNSN RNRKSEFVEG
201: GLFTGQQGEP NGPFSSEHPY AEHPSRTLFV RNIDSNVEDG ELRALFEHYG DIHTLHTACK HRGFVMVSYY DIRAAQNAMQ ALQNKPLRHQ NMDIQFSIPK
301: DNPSEEDINE GMLIVFNLDS SITIDDLRQI FGIYGEIKEI SETPHKHHHK FIEFYDVRAA AAALHALNKS DIAGKKIKLE PSRPGGARQS LMQQLSPELE
401: QEELDGCWQG SPKNSLPGCL GSSSLGPITP NNLENGALRG LPSAIQAPFT PLMGTTFHGF SSSVPQNLSS PVKIASVDNH TNQATHADIS PSVGQINTGF
501: QGMSDMHPHS LPDYHNGISN SIPYNSNTTS TMGIGVISRP SGGIDKRHLQ KVGSGSFNGH SFNANEAFGV SSNGSYPLQG HQYVWTNTNA FPHKPPGSML
601: WSNSSLLINN IPAHQPSQIH GIPRAQSHLL NTLHHHVGSA PSVNPSLLDG RHAYAGDSME QPAFHPGSLG NMGLSAIPQL KSLELASRNI FSPSSGNCLD
701: PCLSPAHIRI PSPQQRGHMF HGRNPMFPVT GPFDGSTDRI RSRRNDTNVN QCDNKKQYEL DIERIIRGED SRTTLMIKNI PNKYTSKMLL AAIDENHRGT
801: YDFIYLPIDF KNKCNVGYAF INMINPQHII PFYQSFNGKK WEKFNSEKVA SLAYARIQGK TALIAHFQNS SLMNEDKRCR PILFHTDGPN AGDQEPFPVG
901: TNVRSRSRSR TVSGGEENHQ GGISAYANGE ASCDAVGYPP ASTKDSDRHK PIFLGEADFG AKLEA
101: KKLRLSSRIV PFGQSVNSVN SNFGEDEPFE SMEEIEARTI GNLLPDDDDL FPGAAENIGY IHRPSNGNDI DDDIFYSGGG MELESDDNSN RNRKSEFVEG
201: GLFTGQQGEP NGPFSSEHPY AEHPSRTLFV RNIDSNVEDG ELRALFEHYG DIHTLHTACK HRGFVMVSYY DIRAAQNAMQ ALQNKPLRHQ NMDIQFSIPK
301: DNPSEEDINE GMLIVFNLDS SITIDDLRQI FGIYGEIKEI SETPHKHHHK FIEFYDVRAA AAALHALNKS DIAGKKIKLE PSRPGGARQS LMQQLSPELE
401: QEELDGCWQG SPKNSLPGCL GSSSLGPITP NNLENGALRG LPSAIQAPFT PLMGTTFHGF SSSVPQNLSS PVKIASVDNH TNQATHADIS PSVGQINTGF
501: QGMSDMHPHS LPDYHNGISN SIPYNSNTTS TMGIGVISRP SGGIDKRHLQ KVGSGSFNGH SFNANEAFGV SSNGSYPLQG HQYVWTNTNA FPHKPPGSML
601: WSNSSLLINN IPAHQPSQIH GIPRAQSHLL NTLHHHVGSA PSVNPSLLDG RHAYAGDSME QPAFHPGSLG NMGLSAIPQL KSLELASRNI FSPSSGNCLD
701: PCLSPAHIRI PSPQQRGHMF HGRNPMFPVT GPFDGSTDRI RSRRNDTNVN QCDNKKQYEL DIERIIRGED SRTTLMIKNI PNKYTSKMLL AAIDENHRGT
801: YDFIYLPIDF KNKCNVGYAF INMINPQHII PFYQSFNGKK WEKFNSEKVA SLAYARIQGK TALIAHFQNS SLMNEDKRCR PILFHTDGPN AGDQEPFPVG
901: TNVRSRSRSR TVSGGEENHQ GGISAYANGE ASCDAVGYPP ASTKDSDRHK PIFLGEADFG AKLEA
001: MRGVSTPSHF HEDIHITSER QFGFMKTDMM PENQGGRDRL SSMPKSSWTS ESYQLKPQSS FSGSHPSGSP NARNTTNGSQ WESSLFSSSM SDLFSRKLRL
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.