Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytoskeleton 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P02820_001 | Banana | cytosol, nucleus, plastid | 52.44 | 59.6 |
| KRH31364 | Soybean | cytosol, nucleus | 17.42 | 57.8 |
| GSMUA_Achr8P32080_001 | Banana | nucleus | 61.32 | 50.94 |
| GSMUA_Achr11P... | Banana | cytosol | 12.02 | 43.12 |
| CDY01848 | Canola | plastid | 35.54 | 40.64 |
| VIT_14s0219g00270.t01 | Wine grape | plastid | 37.98 | 39.0 |
| Zm00001d042445_P001 | Maize | nucleus | 44.43 | 38.4 |
| CDY56219 | Canola | plastid | 35.02 | 38.21 |
| KRG97510 | Soybean | nucleus | 35.71 | 38.03 |
| Solyc05g013930.1.1 | Tomato | nucleus | 41.99 | 38.01 |
| Bra036347.1-P | Field mustard | plastid | 35.02 | 36.95 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 18.99 | 36.82 |
| EES01930 | Sorghum | nucleus | 42.68 | 36.79 |
| Bra004255.1-P | Field mustard | plastid | 35.19 | 36.73 |
| AT1G67770.1 | Thale cress | plastid | 33.62 | 36.62 |
| CDX99727 | Canola | nucleus | 38.33 | 36.48 |
| Os01t0907900-01 | Rice | nucleus | 43.21 | 36.31 |
| CDX83589 | Canola | nucleus | 36.59 | 36.14 |
| CDY40990 | Canola | nucleus | 38.5 | 36.11 |
| HORVU3Hr1G091930.1 | Barley | nucleus | 42.16 | 35.75 |
| TraesCS3B01G447800.1 | Wheat | nucleus | 41.99 | 35.65 |
| CDY13612 | Canola | nucleus | 37.63 | 35.53 |
| AT3G26120.1 | Thale cress | nucleus | 37.98 | 35.45 |
| TraesCS3A01G413400.1 | Wheat | nucleus | 41.99 | 35.44 |
| Bra025185.1-P | Field mustard | nucleus | 37.46 | 35.36 |
| TraesCS3D01G407900.1 | Wheat | nucleus | 41.99 | 35.29 |
| VIT_01s0137g00320.t01 | Wine grape | nucleus | 39.37 | 34.35 |
| PGSC0003DMT400027957 | Potato | nucleus | 28.05 | 33.26 |
| KRH31365 | Soybean | nucleus | 15.85 | 28.0 |
| GSMUA_Achr6P13670_001 | Banana | nucleus | 20.56 | 19.09 |
| GSMUA_Achr10P... | Banana | nucleus | 23.52 | 16.01 |
| GSMUA_Achr6P11050_001 | Banana | nucleus | 25.78 | 15.34 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 24.04 | 14.9 |
| GSMUA_Achr4P31220_001 | Banana | plastid | 23.0 | 14.67 |
| GSMUA_Achr10P... | Banana | nucleus | 24.39 | 14.64 |
| GSMUA_Achr10P... | Banana | nucleus | 25.44 | 14.44 |
| GSMUA_Achr2P20130_001 | Banana | nucleus | 23.34 | 10.91 |
| GSMUA_Achr3P03100_001 | Banana | nucleus | 23.69 | 10.24 |
| GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 23.87 | 9.96 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | InterPro:EAR1_like_RRM3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | EnsemblPlantsGene:GSMUA_Achr8G01280_001 | EnsemblPlants:GSMUA_Achr8P01280_001 | EnsemblPlants:GSMUA_Achr8T01280_001 | InterPro:IPR000504 | InterPro:IPR012677 |
| UniProt:M0TLN0 | InterPro:Mei2-like | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF04059 |
| PFscan:PS50102 | PANTHER:PTHR45087 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI0002959983 | SEG:seg | : | : | : | : |
Description
Putative Protein terminal ear1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G01280_001]
Coordinates
chr8:-:1087403..1089922
Molecular Weight (calculated)
62947.1 Da
IEP (calculated)
7.672
GRAVY (calculated)
-0.447
Length
574 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPEARGTLL DPAAAEFHPA ASSRFAVVAH PLQFYFPYRH PPPQPPPAVA VTLVAPPEAA SRAVVLNMVP PHVGEAEVRA AMEPFGGVQA VDTVALTAQG
101: IVTVHFYDLR SAQAAVMAFR EHPATRQHFP ATITGNLACP WGWLSDGVGG RGLTGWPAVS AQFAASGLDE PNQGSILVLN SDPTVSCAAL RQIFEAFGAV
201: KEVRVMTSKQ HHLLVEFYDK RDAARALSEL HGKEVHGRRL VLQFGATGSQ TRSVYFMNSF PLPPRLLRGN PKASRWIRSG PKPLSSSSPG KEFREVGNPS
301: ALLKNSSACD AHDSAGIVER RNRRVSECSK NEYPSPPPSS NVHHHRTNSS WKTHQKKEGD SKFLFKEVQP EESRPTSRGD SRTTVMIRNI PNKYSRKLLL
401: NMLDNHCKHC NEQIGEEDDD PISAYDFVYL PIDFNNKCNV GYGFVNLTSP EAAFRLYKAF HQQPWEVFNS RKICQITYAR LQGLEALMEH FRHSRFACHD
501: DEYMPVVFSP PRDGRQLTDP VPVAGGREAT ARGNNLTDGA SVAPAELDRC AASSTTASTY APPDHGGAGD SDEA
101: IVTVHFYDLR SAQAAVMAFR EHPATRQHFP ATITGNLACP WGWLSDGVGG RGLTGWPAVS AQFAASGLDE PNQGSILVLN SDPTVSCAAL RQIFEAFGAV
201: KEVRVMTSKQ HHLLVEFYDK RDAARALSEL HGKEVHGRRL VLQFGATGSQ TRSVYFMNSF PLPPRLLRGN PKASRWIRSG PKPLSSSSPG KEFREVGNPS
301: ALLKNSSACD AHDSAGIVER RNRRVSECSK NEYPSPPPSS NVHHHRTNSS WKTHQKKEGD SKFLFKEVQP EESRPTSRGD SRTTVMIRNI PNKYSRKLLL
401: NMLDNHCKHC NEQIGEEDDD PISAYDFVYL PIDFNNKCNV GYGFVNLTSP EAAFRLYKAF HQQPWEVFNS RKICQITYAR LQGLEALMEH FRHSRFACHD
501: DEYMPVVFSP PRDGRQLTDP VPVAGGREAT ARGNNLTDGA SVAPAELDRC AASSTTASTY APPDHGGAGD SDEA
001: MEDSRLFPFV GNLDPRAQEF IPFNPISSGF HFPYTPPPPQ LPPPLPPSSY GLSPTEPRVF TFFNIPPHPM MFSPPPPQPP PPPPRPCFNG VSAAQRLPLP
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF
101: SNTPTRSLSL ISVPRDVTES TVRRDLEVYG DVRGVQMERI SEGIVTVHFY DIRDAKRAVR EVCGRHMQQQ ARGGSVWSSP STSSARGFVS GRPVWAQFVV
201: PATSAVPGGC NQGTLVIFNL DPEVSSITLR QIFQVYGPIK ELRETPYKKH QRFVEFYDVR DAARAFDRMN GKEIGGKQVV IEFSRPGGIK NRFRSSRQPQ
301: LPFQPLREPP ILIPPLRRPV SFIKDKNKNV SPKNGVIAVD ASMRSLCIID ADDNKTRGTR GTESECAETK SKNVAKWGKK RQMKNMELSQ FLISEETMED
401: PSCRDPRTTL MIKNIPNKYS QKLLLDMLDK HCIHINEAIT EEHNKHESHH QPYSSYDFVY LPMDFNNKCN VGYGFVNMTS PEAAWRFYKA FHGQRWEVFN
501: SHKICQITYA RVQGLEDLKE HFKSSKFPCE AELYLPVVFS PPRDGKQLTE PVSINITING CTRLNHNHFE QTVGQDHFLS GSCCDSDHDN SHEDGFSGSS
601: VDCGRSITVE GETSF
Arabidopsis Description
TEL1Terminal EAR1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4JBE2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.