Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 71.17 | 68.93 |
| GSMUA_Achr6P11050_001 | Banana | nucleus | 70.19 | 67.36 |
| GSMUA_Achr10P... | Banana | nucleus | 67.17 | 61.52 |
| EES05145 | Sorghum | nucleus | 58.32 | 54.16 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 57.67 | 53.35 |
| TraesCS2D01G286200.6 | Wheat | nucleus | 52.59 | 52.71 |
| TraesCS2B01G304600.1 | Wheat | nucleus | 52.38 | 52.55 |
| TraesCS2A01G287900.4 | Wheat | nucleus | 52.38 | 52.55 |
| Zm00001d016606_P022 | Maize | nucleus | 57.56 | 51.8 |
| HORVU2Hr1G071240.13 | Barley | nucleus | 51.84 | 51.06 |
| Zm00001d050584_P034 | Maize | endoplasmic reticulum, nucleus | 56.48 | 49.62 |
| Zm00001d031675_P001 | Maize | nucleus | 7.45 | 46.94 |
| Zm00001d025278_P025 | Maize | nucleus | 49.03 | 45.58 |
| Zm00001d007808_P002 | Maize | nucleus | 16.95 | 44.1 |
| Zm00001d008781_P003 | Maize | nucleus | 8.86 | 43.85 |
| OQU81438 | Sorghum | plastid | 49.35 | 43.19 |
| GSMUA_Achr6P13670_001 | Banana | nucleus | 28.73 | 43.04 |
| Zm00001d048798_P001 | Maize | nucleus | 15.01 | 41.87 |
| GSMUA_Achr10P... | Banana | nucleus | 37.58 | 41.28 |
| GSMUA_Achr4P31220_001 | Banana | plastid | 36.93 | 38.0 |
| Zm00001d013726_P001 | Maize | nucleus | 8.86 | 35.5 |
| GSMUA_Achr11P... | Banana | cytosol | 5.29 | 30.62 |
| GSMUA_Achr2P20130_001 | Banana | nucleus | 36.61 | 27.61 |
| GSMUA_Achr3P03100_001 | Banana | nucleus | 38.23 | 26.66 |
| GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 39.52 | 26.62 |
| GSMUA_Achr7P02820_001 | Banana | cytosol, nucleus, plastid | 13.61 | 24.95 |
| GSMUA_Achr5P05840_001 | Banana | cytosol, mitochondrion, nucleus, plasma membrane | 7.78 | 24.32 |
| GSMUA_Achr8P01280_001 | Banana | cytoskeleton, cytosol, nucleus | 14.9 | 24.04 |
| GSMUA_Achr8P32080_001 | Banana | nucleus | 15.12 | 20.26 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | EnsemblPlantsGene:GSMUA_Achr2G21440_001 | EnsemblPlants:GSMUA_Achr2P21440_001 | EnsemblPlants:GSMUA_Achr2T21440_001 | InterPro:IPR000504 | InterPro:IPR012677 |
| UniProt:M0S9Y5 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF1 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | SignalP:SignalP-noTM | UniParc:UPI000296CBB0 | SEG:seg | : |
Description
AML1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G21440_001]
Coordinates
chr2:-:20905920..20917615
Molecular Weight (calculated)
102801.0 Da
IEP (calculated)
6.417
GRAVY (calculated)
-0.497
Length
926 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFIFSLLLC LQRQIGFQKP SFVYDHSGEQ YHITESWVSF LIVADHVSES RSDPLALQSS LFSEGNIMDL SGSHFENGLF SSSLSDIFNN KLKLSSNVVQ
101: SVHSVNSNFG EEVFFESMED IEAQTIGNLL PDDDELLSGV TYDKGYTGKP NDETDVDDDI FYSGGGMELE TDDKINENKT YEFAGGGASN YQQGKLNGPF
201: ASEHPYGEHP SRTLFVRNIN SNIEDGELRA LFEQYGDIRT LYTACKHRGF VMISYYDIRA ALNAIQALQN KPLRCWKLDI HFSIPKDNPS EKDVNQGMLL
301: VFNLDSSVTN DDLHQIFGIY GEIKEICSTQ HKCHHKSIEF YDVRAAEAAL HALNGSDIAG RKIRLELSHL GGARWWLSPE LNQEELHGCW HESPNNYLPG
401: CFGPSSLGVN TSKGLENGAI QGLKSAVRAP FNPIIEATFH GMSSSMSQNL PSPIRVASVG NIEAAHSDIT HSLGQMNFEF QDMPGFHPRS LPDYHDEVNN
501: DIPYHSSTMS AVGTGVISRP VEGIDKRHLQ KVGSASFNGH ATDHNEAFCS ANGSCSLQGH QYVWNNTNVF HHKTPSPMSW SNPPSFINNI PTNPSQIHGI
601: PRGQSHMVNT VVPLHHHVGS APAVNPSLWG RRHTYGGDSI ERPAFHPGSH GSMGLSAASQ LHWLELTSHN IFSRVGGNCM DPSVSLAHIG ILSPQQRGHI
701: YHGRNPIFPM PGSFDGPTER IRSRRNDTNA TQSDNKKQYE LDIERIICGE DSRTTLMIKN IPNKYTSKML LAAIDENHRG TYDFIYLPID FKNKCNVGYA
801: FINMVNTQHI IPFYQSFNGK KWEKFNSEKV ASLAYARIQG KAALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPV GTNIKSRSGR WRTDSSEENH
901: QGDKSTSANG EASCVAAVSP SGPQKI
101: SVHSVNSNFG EEVFFESMED IEAQTIGNLL PDDDELLSGV TYDKGYTGKP NDETDVDDDI FYSGGGMELE TDDKINENKT YEFAGGGASN YQQGKLNGPF
201: ASEHPYGEHP SRTLFVRNIN SNIEDGELRA LFEQYGDIRT LYTACKHRGF VMISYYDIRA ALNAIQALQN KPLRCWKLDI HFSIPKDNPS EKDVNQGMLL
301: VFNLDSSVTN DDLHQIFGIY GEIKEICSTQ HKCHHKSIEF YDVRAAEAAL HALNGSDIAG RKIRLELSHL GGARWWLSPE LNQEELHGCW HESPNNYLPG
401: CFGPSSLGVN TSKGLENGAI QGLKSAVRAP FNPIIEATFH GMSSSMSQNL PSPIRVASVG NIEAAHSDIT HSLGQMNFEF QDMPGFHPRS LPDYHDEVNN
501: DIPYHSSTMS AVGTGVISRP VEGIDKRHLQ KVGSASFNGH ATDHNEAFCS ANGSCSLQGH QYVWNNTNVF HHKTPSPMSW SNPPSFINNI PTNPSQIHGI
601: PRGQSHMVNT VVPLHHHVGS APAVNPSLWG RRHTYGGDSI ERPAFHPGSH GSMGLSAASQ LHWLELTSHN IFSRVGGNCM DPSVSLAHIG ILSPQQRGHI
701: YHGRNPIFPM PGSFDGPTER IRSRRNDTNA TQSDNKKQYE LDIERIICGE DSRTTLMIKN IPNKYTSKML LAAIDENHRG TYDFIYLPID FKNKCNVGYA
801: FINMVNTQHI IPFYQSFNGK KWEKFNSEKV ASLAYARIQG KAALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPV GTNIKSRSGR WRTDSSEENH
901: QGDKSTSANG EASCVAAVSP SGPQKI
001: MRGVSTPSHF HEDIHITSER QFGFMKTDMM PENQGGRDRL SSMPKSSWTS ESYQLKPQSS FSGSHPSGSP NARNTTNGSQ WESSLFSSSM SDLFSRKLRL
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
101: QGSDMLSTMS ANTVVTHREE EPSESLEEIE AQTIGNLLPD EDDLFAEVTG EVGRKSRANT GDELDEFDLF SSVGGMELDG DIFSSVSHRN GERGGNNSVG
201: ELNRGEIPSR TLLVGNISSN VEDYELKVLF EQFGDIQALH TACKNRGFIM VSYCDIRAAQ NAARALQNKL LRGTKLDIRY SISKENPSQK DTSKGALLVN
301: NLDSSISNQE LNRLVKSYGE VKEIRRTMHD NSQIYIEFFD VRAAAAALGG LNGLEVAGKK LQLVPTYPEG TRYTSQCAAN DTEGCLPKTS YSNTSSGHIG
401: RHFPGMISST SSDGGSMRVI HNSIGSPVNS FIERHRSLSI PIGFPPSANG ISASKPVGLQ EHGHHFDNSN MGIQSMPNLH PHSFSEYVDN FANGSPYTSS
501: AFSEMVSDGS KANEGFMIHN VRGVEGFSGG GIGSPMHQSS RRPINLWSNS NTQQQNPSSG MMWPNSPSHI NSIPTQRPPV TVFSRAPPIM VNMASSPVHH
601: HIGSAPVLNS PFWDRRQAYV AESLESSGFH IGSHGSMGIP GSSPSHPMDI GSHKTFSVGG NRMDVNSQNA VLRSPQQLSH LFPGRSPMGS MPGSFDSPNE
701: RYRNLSHRRS ESSSSNADKK LYELDVDRIL RGEDRRTTLM IKNIPNKYTS KMLLSAIDEH CKGTYDFLYL PIDFKNKCNV GYAFINLIEP EKIVPFFKAF
801: NGKKWEKFNS EKVATLTYAR IQGKTALIAH FQNSSLMNED KRCRPILFHT DGPNAGDQEP FPMGSNIRSR PGKPRSSSID NYNSFSISSV SENREETPNG
901: TDPFLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.