Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05145 | Sorghum | nucleus | 82.02 | 82.35 |
| Zm00001d016606_P022 | Maize | nucleus | 79.82 | 77.65 |
| Zm00001d050584_P034 | Maize | endoplasmic reticulum, nucleus | 78.72 | 74.76 |
| Zm00001d008781_P003 | Maize | nucleus | 13.29 | 71.12 |
| Zm00001d048798_P001 | Maize | nucleus | 21.58 | 65.06 |
| Zm00001d007808_P002 | Maize | nucleus | 22.88 | 64.33 |
| TraesCS2D01G286200.6 | Wheat | nucleus | 58.64 | 63.53 |
| TraesCS2A01G287900.4 | Wheat | nucleus | 58.54 | 63.49 |
| TraesCS2B01G304600.1 | Wheat | nucleus | 58.44 | 63.38 |
| HORVU2Hr1G071240.13 | Barley | nucleus | 58.44 | 62.23 |
| Zm00001d031675_P001 | Maize | nucleus | 8.69 | 59.18 |
| GSMUA_Achr10P... | Banana | nucleus | 59.44 | 58.85 |
| GSMUA_Achr10P... | Banana | nucleus | 55.14 | 57.74 |
| GSMUA_Achr2P21440_001 | Banana | mitochondrion, nucleus | 53.35 | 57.67 |
| GSMUA_Achr6P11050_001 | Banana | nucleus | 54.55 | 56.58 |
| Zm00001d013726_P001 | Maize | nucleus | 11.89 | 51.52 |
| Os05t0102800-01 | Rice | nucleus | 44.16 | 46.28 |
| Os02t0719800-02 | Rice | plasma membrane | 35.66 | 42.1 |
| Os02t0319100-01 | Rice | nucleus | 32.37 | 39.95 |
| Os09t0531200-01 | Rice | cytosol | 6.39 | 19.81 |
| Os01t0907900-01 | Rice | nucleus | 13.39 | 19.62 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 5.29 | 13.62 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EntrezGene:9271988 | EMBL:AB244279 | EMBL:AK121247 | ProteinID:BAD46727.1 |
| ProteinID:BAH91717.1 | ProteinID:BAS78913.1 | ProteinID:EEE57084.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C |
| InterPro:Nucleotide-bd_a/b_plait_sf | EnsemblPlantsGene:Os02g0517531 | EnsemblPlants:Os02t0517531-01 | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 |
| PANTHER:PTHR44127 | PANTHER:PTHR44127:SF1 | UniProt:Q64M78 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI000043A612 | RefSeq:XP_015625574.1 | SEG:seg | : | : |
Description
ML4Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0517531-01);Similar to Mei2-like protein. (Os02t0517531-02)
Coordinates
chr2:+:18769958..18777995
Molecular Weight (calculated)
110375.0 Da
IEP (calculated)
6.875
GRAVY (calculated)
-0.648
Length
1001 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPSQVMDQRH HMSQYSHPTL AASSFSEELR LPTERQVGFW KQESLPHHMG SKSVASSPIE KPQPIGTRMA GRLELLQPYK LRDQGAAFSL EHKLFGQERH
0101: ANLPPSPWRP DQETGRQTDS SLKSAALFSD GRINPNGAYN ENGLFSSSVS DIFDKKLRLT SKNGLVGQSI EKVDLNHVDD EPFELTEEIE AQIIGNLLPD
0201: DDDLLSGVVD EVGYPTNANN RDDADDDIFY TGGGMELETD ENKKLQEFNG SANDGIGLLN GVLNGEHLYR EQPSRTLFVR NINSNVEDSE LKLLFEHFGD
0301: IRALYTACKH RGFVMISYYD IRSALNAKME LQNKALRRRK LDIHYSIPKD NPSEKDINQG TIVLFNVDLS LTNDDLHKIF GDYGEIKEIR DTPQKGHHKI
0401: IEFYDVRAAE AALRALNRND IAGKKIKLET SRLGAARRLS QHMSSELCQE EFGVCKLGSP STSSPPIASF GSTNLATITS TGHENGSIQG MHSGLQTSIS
0501: QFRETSFPGL SSTIPQSLST PIGISSGATH SNQAALGEIS QSLGRMNGHM NYSFQGMSAL HPHSLPEVHN GVNNGVPYNL NSMAQVVNGT NSRTAEAVDN
0601: RHLHKVGSGN LNGHSFDRAE GALGFSRSGS SSVRGHQLMW NNSSNFHHHP NSPVLWPSPG SFVNNVPSRS PAQMHGVPRA PSSHMIDNVL PMHHLHVGSA
0701: PAINPSLWDR RHGYAGELTE APNFHPGSVG SMGFPGSPQL HSMELNNIYP QTGGNCMDPT VSPAQIGGPS PQQRGSMFHG RNPMVPLPSF DSPGERMRSR
0801: RNDSNGNQSD NKKQYELDVD RIVRGDDSRT TLMIKNIPNK YTSKMLLAAI DENHKGTYDF IYLPIDFKNK CNVGYAFINM TNPQHIIPFY QTFNGKKWEK
0901: FNSEKVASLA YARIQGKSAL IAHFQNSSLM NEDKRCRPIL FHSDGPNAGD QEPFPMGTNI RARSGRSRAS SGEESHQDIS ITSVNCDTST NGVDTTGPAK
1001: D
0101: ANLPPSPWRP DQETGRQTDS SLKSAALFSD GRINPNGAYN ENGLFSSSVS DIFDKKLRLT SKNGLVGQSI EKVDLNHVDD EPFELTEEIE AQIIGNLLPD
0201: DDDLLSGVVD EVGYPTNANN RDDADDDIFY TGGGMELETD ENKKLQEFNG SANDGIGLLN GVLNGEHLYR EQPSRTLFVR NINSNVEDSE LKLLFEHFGD
0301: IRALYTACKH RGFVMISYYD IRSALNAKME LQNKALRRRK LDIHYSIPKD NPSEKDINQG TIVLFNVDLS LTNDDLHKIF GDYGEIKEIR DTPQKGHHKI
0401: IEFYDVRAAE AALRALNRND IAGKKIKLET SRLGAARRLS QHMSSELCQE EFGVCKLGSP STSSPPIASF GSTNLATITS TGHENGSIQG MHSGLQTSIS
0501: QFRETSFPGL SSTIPQSLST PIGISSGATH SNQAALGEIS QSLGRMNGHM NYSFQGMSAL HPHSLPEVHN GVNNGVPYNL NSMAQVVNGT NSRTAEAVDN
0601: RHLHKVGSGN LNGHSFDRAE GALGFSRSGS SSVRGHQLMW NNSSNFHHHP NSPVLWPSPG SFVNNVPSRS PAQMHGVPRA PSSHMIDNVL PMHHLHVGSA
0701: PAINPSLWDR RHGYAGELTE APNFHPGSVG SMGFPGSPQL HSMELNNIYP QTGGNCMDPT VSPAQIGGPS PQQRGSMFHG RNPMVPLPSF DSPGERMRSR
0801: RNDSNGNQSD NKKQYELDVD RIVRGDDSRT TLMIKNIPNK YTSKMLLAAI DENHKGTYDF IYLPIDFKNK CNVGYAFINM TNPQHIIPFY QTFNGKKWEK
0901: FNSEKVASLA YARIQGKSAL IAHFQNSSLM NEDKRCRPIL FHSDGPNAGD QEPFPMGTNI RARSGRSRAS SGEESHQDIS ITSVNCDTST NGVDTTGPAK
1001: D
001: MPSDIMEQRG VSTPSHFHED IHITSERQFG FMKTDMMPEN QGGRDRLSSM PKSSWTSESY QLKPQSSFSG SHPSGSPNAR NTTNGSQWES SLFSSSMSDL
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
101: FSRKLRLQGS DMLSTMSANT VVTHREEEPS ESLEEIEAQT IGNLLPDEDD LFAEVTGEVG RKSRANTGDE LDEFDLFSSV GGMELDGDIF SSVSHRNGER
201: GGNNSVGELN RGEIPSRTLL VGNISSNVED YELKVLFEQF GDIQALHTAC KNRGFIMVSY CDIRAAQNAA RALQNKLLRG TKLDIRYSIS KENPSQKDTS
301: KGALLVNNLD SSISNQELNR LVKSYGEVKE IRRTMHDNSQ IYIEFFDVRA AAAALGGLNG LEVAGKKLQL VPTYPEGTRY TSQCAANDTE GCLPKTSYSN
401: TSSGHIGRHF PGMISSTSSD GGSMRVIHNS IGSPVNSFIE RHRSLSIPIG FPPSANGISA SKPVGLQEHG HHFDNSNMGI QSMPNLHPHS FSEYVDNFAN
501: GSPYTSSAFS EMVSDGSKAN EGFMIHNVRG VEGFSGGGIG SPMHQSSRRP INLWSNSNTQ QQNPSSGMMW PNSPSHINSI PTQRPPVTVF SRAPPIMVNM
601: ASSPVHHHIG SAPVLNSPFW DRRQAYVAES LESSGFHIGS HGSMGIPGSS PSHPMDIGSH KTFSVGGNRM DVNSQNAVLR SPQQLSHLFP GRSPMGSMPG
701: SFDSPNERYR NLSHRRSESS SSNADKKLYE LDVDRILRGE DRRTTLMIKN IPNKYTSKML LSAIDEHCKG TYDFLYLPID FKNKCNVGYA FINLIEPEKI
801: VPFFKAFNGK KWEKFNSEKV ATLTYARIQG KTALIAHFQN SSLMNEDKRC RPILFHTDGP NAGDQEPFPM GSNIRSRPGK PRSSSIDNYN SFSISSVSEN
901: REETPNGTDP FLKEN
Arabidopsis Description
ML1Protein MEI2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4I9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.