Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89028 | Sorghum | nucleus | 82.43 | 82.72 |
| TraesCS7A01G003100.1 | Wheat | plastid | 82.67 | 80.76 |
| TraesCS7D01G003000.1 | Wheat | plastid | 82.08 | 80.0 |
| TraesCS4A01G495500.1 | Wheat | plastid | 82.55 | 79.91 |
| Zm00001d035869_P017 | Maize | golgi | 80.31 | 79.84 |
| Zm00001d045611_P001 | Maize | nucleus | 79.6 | 79.69 |
| HORVU7Hr1G000370.12 | Barley | nucleus, plastid | 82.9 | 79.17 |
| GSMUA_Achr10P... | Banana | nucleus | 57.67 | 58.01 |
| VIT_10s0003g02670.t01 | Wine grape | nucleus | 60.02 | 57.58 |
| KRH12823 | Soybean | nucleus | 57.9 | 56.96 |
| KRH37781 | Soybean | nucleus | 57.43 | 56.5 |
| PGSC0003DMT400007982 | Potato | nucleus | 52.36 | 52.17 |
| Solyc02g071270.1.1 | Tomato | extracellular | 50.47 | 50.53 |
| Os02t0319100-01 | Rice | nucleus | 48.23 | 50.43 |
| GSMUA_Achr4P31220_001 | Banana | plastid | 52.95 | 49.89 |
| GSMUA_Achr6P13670_001 | Banana | nucleus | 34.55 | 47.41 |
| GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 58.49 | 36.07 |
| Os02t0517531-01 | Rice | nucleus, plasma membrane | 42.1 | 35.66 |
| GSMUA_Achr3P03100_001 | Banana | nucleus | 55.42 | 35.39 |
| GSMUA_Achr2P20130_001 | Banana | nucleus | 50.12 | 34.61 |
| Os05t0102800-01 | Rice | nucleus | 34.79 | 30.89 |
| Os01t0907900-01 | Rice | nucleus | 16.16 | 20.06 |
| Os09t0531200-01 | Rice | cytosol | 7.43 | 19.5 |
| Os02t0157900-00 | Rice | mitochondrion, plastid | 6.37 | 13.88 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EntrezGene:4330544 | EMBL:AB244277 | EMBL:AK111503 | ProteinID:BAD12869.1 |
| ProteinID:BAF09860.1 | ProteinID:BAS80635.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C |
| InterPro:Nucleotide-bd_a/b_plait_sf | EnsemblPlantsGene:Os02g0719800 | EnsemblPlants:Os02t0719800-02 | PFAM:PF00076 | PFAM:PF04059 | PFscan:PS50102 |
| PANTHER:PTHR44127 | PANTHER:PTHR44127:SF2 | UniProt:Q6ZI17 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI00003503A2 | RefSeq:XP_015624974.1 | SEG:seg | : | : |
Description
ML2Similar to AML1. (Os02t0719800-01);Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0719800-02);Similar to AML1. (Os02t0719800-03)
Coordinates
chr2:+:29859289..29867367
Molecular Weight (calculated)
93617.5 Da
IEP (calculated)
6.609
GRAVY (calculated)
-0.645
Length
848 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRPQDPFNS RGIAVPPAVK MRNMAGNNSP WIDPLPPPMN ARNGLANASL FSTSLPVLPH EKINFLDSAR GTPLMDDASA KLKELDDDPE GKDYKFDFDL
101: RQIDDLLPNE DDLFAGITNE IEPAGQTNSM EELEEFDVFG SGGGMELDTD PVESITAGLG NTSIADGLRG NGVNHFGPSN SASTVAGEHP YGEHPSRTLF
201: VRNINSNVDD TELRSLFEQY GDIRTLYTAT KHRGFVMISY FDIRAARGAM RGLQNKPLRR RKLDIHFSIP KENPSDKDLN QGTLVIFNLD PSVSNEEVRQ
301: IFGTYGEVKE IRETPNKKHH KFIEFYDVRA AEAALRSLNK SEIAGKRIKL EPSRPGGTRR NLMQQLGHDI DQDEPRSYRI PHVGSPIASS PPGAWAQYSS
401: PTDNNLLQAF NASPTGNGMS PIGMPPSLIS NAVKIAPIGK DSNWSKYDKV FSNNNQPHGA AFQHSHSYQD HKSEHMSSSP GTLTGPEFLW GSPKPYSEHA
501: QSPIWRPPAI GHAIPSNTRS QGQGLLYGGR QASLFGSQDQ LHHHHVGSAP SGAPFESHFG FLPESPETSY MNQVRFGNIG NIGSGRNGTG LMLNMAARAS
601: VNPVSALSGN MSDNNSSSFR PILSPRLGQS FYGNPTYQGP GSFGLDNSIE RGRNRRVDSS VFQADSKKQY QLDLEKIRKG DDTRTTLMIK NIPNKYTSKM
701: LLAAIDEFHK GTYDFFYLPI DFKNKCNVGY AFINMISPVH IVSFYQAFNG KKWEKFNSEK VASLAYARIQ GRTALISHFQ NSSLMNEDKR CRPILFHSNG
801: PDAGNQEPFP INGICIHMPL EDGAIATGDP FGNEEDNNQN ERTAGEEL
101: RQIDDLLPNE DDLFAGITNE IEPAGQTNSM EELEEFDVFG SGGGMELDTD PVESITAGLG NTSIADGLRG NGVNHFGPSN SASTVAGEHP YGEHPSRTLF
201: VRNINSNVDD TELRSLFEQY GDIRTLYTAT KHRGFVMISY FDIRAARGAM RGLQNKPLRR RKLDIHFSIP KENPSDKDLN QGTLVIFNLD PSVSNEEVRQ
301: IFGTYGEVKE IRETPNKKHH KFIEFYDVRA AEAALRSLNK SEIAGKRIKL EPSRPGGTRR NLMQQLGHDI DQDEPRSYRI PHVGSPIASS PPGAWAQYSS
401: PTDNNLLQAF NASPTGNGMS PIGMPPSLIS NAVKIAPIGK DSNWSKYDKV FSNNNQPHGA AFQHSHSYQD HKSEHMSSSP GTLTGPEFLW GSPKPYSEHA
501: QSPIWRPPAI GHAIPSNTRS QGQGLLYGGR QASLFGSQDQ LHHHHVGSAP SGAPFESHFG FLPESPETSY MNQVRFGNIG NIGSGRNGTG LMLNMAARAS
601: VNPVSALSGN MSDNNSSSFR PILSPRLGQS FYGNPTYQGP GSFGLDNSIE RGRNRRVDSS VFQADSKKQY QLDLEKIRKG DDTRTTLMIK NIPNKYTSKM
701: LLAAIDEFHK GTYDFFYLPI DFKNKCNVGY AFINMISPVH IVSFYQAFNG KKWEKFNSEK VASLAYARIQ GRTALISHFQ NSSLMNEDKR CRPILFHSNG
801: PDAGNQEPFP INGICIHMPL EDGAIATGDP FGNEEDNNQN ERTAGEEL
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.