Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7D01G003000.1 | Wheat | plastid | 98.5 | 98.28 |
TraesCS4A01G495500.1 | Wheat | plastid | 98.27 | 97.37 |
HORVU7Hr1G000370.12 | Barley | nucleus, plastid | 96.89 | 94.71 |
Os02t0719800-02 | Rice | plasma membrane | 80.76 | 82.67 |
EER89028 | Sorghum | nucleus | 78.23 | 80.36 |
Zm00001d045611_P001 | Maize | nucleus | 76.61 | 78.51 |
Zm00001d035869_P017 | Maize | golgi | 76.38 | 77.73 |
GSMUA_Achr10P... | Banana | nucleus | 56.34 | 58.01 |
VIT_10s0003g02670.t01 | Wine grape | nucleus | 58.18 | 57.13 |
KRH37781 | Soybean | nucleus | 54.84 | 55.22 |
KRH12823 | Soybean | nucleus | 54.72 | 55.1 |
PGSC0003DMT400007982 | Potato | nucleus | 52.3 | 53.35 |
Solyc02g071270.1.1 | Tomato | extracellular | 49.54 | 50.77 |
GSMUA_Achr4P31220_001 | Banana | plastid | 50.92 | 49.11 |
GSMUA_Achr6P13670_001 | Banana | nucleus | 34.91 | 49.03 |
GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 57.49 | 36.29 |
GSMUA_Achr3P03100_001 | Banana | nucleus | 54.61 | 35.69 |
GSMUA_Achr2P20130_001 | Banana | nucleus | 50.0 | 35.34 |
TraesCS2A01G287900.4 | Wheat | nucleus | 36.75 | 34.56 |
TraesCS1A01G005800.2 | Wheat | nucleus | 34.1 | 30.55 |
TraesCS6A01G131000.1 | Wheat | mitochondrion | 4.95 | 24.43 |
TraesCS3A01G413400.1 | Wheat | nucleus | 15.67 | 20.0 |
TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 4.03 | 14.0 |
Protein Annotations
Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR000504 |
InterPro:IPR012677 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
SMART:SM00360 | SUPFAM:SSF54928 | EnsemblPlantsGene:TraesCS7A01G003100 | EnsemblPlants:TraesCS7A01G003100.1 | TIGR:cd12524 | TIGR:cd12529 |
TIGR:cd12531 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:1719539..1723775
Molecular Weight (calculated)
95095.0 Da
IEP (calculated)
6.686
GRAVY (calculated)
-0.655
Length
868 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSPAPLSP PGFAVPLAVK KRQQAAPGYS SSSSPWGVPP APPLTNNNPN PPNGLRAGDT SIFSTSLPVL PHEKLNFPDS AHGTPSMDDA SAKLKEFDDD
101: PQGNDYPFDF DLRQIDDLLP DEDELFAGIT NEIEPAGQTN PAEELEEFDV FGSGGGMELD SDPLDSITAG LGNASIGDGI RANGVNNNFG LSNSPGAVAG
201: EHPLGEHPSR TLFVRNINSN VEDSELRSLF EQFGDIRTLY TATKHRGFVM ISYFDIRAAR GAMRSLQNKP LRRRKLDIHF SIPKENPSDK DLNQGTLVIF
301: NLDPSVSNEE VRQIFGTYGE VKEIRETPNK KHHKFIEFYD VRAAEAALRS LNKSEIAGKR IKLEPSRPGG TRRSLVQHLG HELEDEPRGY RHSHVGSPMA
401: NSPPGAWAQY GSPTDNNLLH AFSNSPTGNG MSPIGMSPSM MSNALKIAPI GKDNNWSKYD QVFSNSNQSL GAAFQHSQSY QDRKSDHMSS SPGTLTGPEF
501: LWGSPKPYPE HSQSSSMWRP PPVGHAMSSS SRPQGQGFLY GSRQASLFGS LDQNRHHVGS APSGAPFESH FGFLPESPET SFMNQVRFAN MGNIGGANRN
601: GGSLMLNMAS RASLNPVSAL SGSLTDNNST NFRPVPSPRL GQPPFFGNTT YQGPGYYGLD SSTIERGRNR RVDSSAFQAD SKKQYQLDLD KIRKGEDTRT
701: TLMIKNIPNK YTSKMLLAAI DELHKGTYDF FYLPIDFKNK CNVGYAFINM ISPVHIVSFY QAFNGKKWEK FNSEKVASLA YGRIQGRNAL ISHFQNSSLM
801: NEDKRCRPIL FHSNGPETGN QEPFPNGICI HMPLDGGAGS SKEPLGFEED DNPNEIKISG EKSMVGSL
101: PQGNDYPFDF DLRQIDDLLP DEDELFAGIT NEIEPAGQTN PAEELEEFDV FGSGGGMELD SDPLDSITAG LGNASIGDGI RANGVNNNFG LSNSPGAVAG
201: EHPLGEHPSR TLFVRNINSN VEDSELRSLF EQFGDIRTLY TATKHRGFVM ISYFDIRAAR GAMRSLQNKP LRRRKLDIHF SIPKENPSDK DLNQGTLVIF
301: NLDPSVSNEE VRQIFGTYGE VKEIRETPNK KHHKFIEFYD VRAAEAALRS LNKSEIAGKR IKLEPSRPGG TRRSLVQHLG HELEDEPRGY RHSHVGSPMA
401: NSPPGAWAQY GSPTDNNLLH AFSNSPTGNG MSPIGMSPSM MSNALKIAPI GKDNNWSKYD QVFSNSNQSL GAAFQHSQSY QDRKSDHMSS SPGTLTGPEF
501: LWGSPKPYPE HSQSSSMWRP PPVGHAMSSS SRPQGQGFLY GSRQASLFGS LDQNRHHVGS APSGAPFESH FGFLPESPET SFMNQVRFAN MGNIGGANRN
601: GGSLMLNMAS RASLNPVSAL SGSLTDNNST NFRPVPSPRL GQPPFFGNTT YQGPGYYGLD SSTIERGRNR RVDSSAFQAD SKKQYQLDLD KIRKGEDTRT
701: TLMIKNIPNK YTSKMLLAAI DELHKGTYDF FYLPIDFKNK CNVGYAFINM ISPVHIVSFY QAFNGKKWEK FNSEKVASLA YGRIQGRNAL ISHFQNSSLM
801: NEDKRCRPIL FHSNGPETGN QEPFPNGICI HMPLDGGAGS SKEPLGFEED DNPNEIKISG EKSMVGSL
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.