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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G003000.1 Wheat plastid 98.5 98.28
TraesCS4A01G495500.1 Wheat plastid 98.27 97.37
HORVU7Hr1G000370.12 Barley nucleus, plastid 96.89 94.71
Os02t0719800-02 Rice plasma membrane 80.76 82.67
EER89028 Sorghum nucleus 78.23 80.36
Zm00001d045611_P001 Maize nucleus 76.61 78.51
Zm00001d035869_P017 Maize golgi 76.38 77.73
GSMUA_Achr10P... Banana nucleus 56.34 58.01
VIT_10s0003g02670.t01 Wine grape nucleus 58.18 57.13
KRH37781 Soybean nucleus 54.84 55.22
KRH12823 Soybean nucleus 54.72 55.1
PGSC0003DMT400007982 Potato nucleus 52.3 53.35
Solyc02g071270.1.1 Tomato extracellular 49.54 50.77
GSMUA_Achr4P31220_001 Banana plastid 50.92 49.11
GSMUA_Achr6P13670_001 Banana nucleus 34.91 49.03
GSMUA_Achr6P13690_001 Banana golgi, plasma membrane 57.49 36.29
GSMUA_Achr3P03100_001 Banana nucleus 54.61 35.69
GSMUA_Achr2P20130_001 Banana nucleus 50.0 35.34
TraesCS2A01G287900.4 Wheat nucleus 36.75 34.56
TraesCS1A01G005800.2 Wheat nucleus 34.1 30.55
TraesCS6A01G131000.1 Wheat mitochondrion 4.95 24.43
TraesCS3A01G413400.1 Wheat nucleus 15.67 20.0
TraesCS5A01G319000.1 Wheat cytosol, nucleus, plasma membrane, plastid 4.03 14.0
Protein Annotations
Gene3D:3.30.70.330MapMan:35.1GO:GO:0003674GO:GO:0003676GO:GO:0005488InterPro:IPR000504
InterPro:IPR012677InterPro:MEI2-like_RRM3InterPro:MEI2_like_RRM1InterPro:Mei2-like_Rrm_CInterPro:Nucleotide-bd_a/b_plait_sfPFAM:PF00076
PFAM:PF04059PFscan:PS50102PANTHER:PTHR44127PANTHER:PTHR44127:SF5InterPro:RBD_domain_sfInterPro:RRM_dom
SMART:SM00360SUPFAM:SSF54928EnsemblPlantsGene:TraesCS7A01G003100EnsemblPlants:TraesCS7A01G003100.1TIGR:cd12524TIGR:cd12529
TIGR:cd12531SEG:seg::::
Description
No Description!
Coordinates
chr7A:-:1719539..1723775
Molecular Weight (calculated)
95095.0 Da
IEP (calculated)
6.686
GRAVY (calculated)
-0.655
Length
868 amino acids
Sequence
(BLAST)
001: MDRSPAPLSP PGFAVPLAVK KRQQAAPGYS SSSSPWGVPP APPLTNNNPN PPNGLRAGDT SIFSTSLPVL PHEKLNFPDS AHGTPSMDDA SAKLKEFDDD
101: PQGNDYPFDF DLRQIDDLLP DEDELFAGIT NEIEPAGQTN PAEELEEFDV FGSGGGMELD SDPLDSITAG LGNASIGDGI RANGVNNNFG LSNSPGAVAG
201: EHPLGEHPSR TLFVRNINSN VEDSELRSLF EQFGDIRTLY TATKHRGFVM ISYFDIRAAR GAMRSLQNKP LRRRKLDIHF SIPKENPSDK DLNQGTLVIF
301: NLDPSVSNEE VRQIFGTYGE VKEIRETPNK KHHKFIEFYD VRAAEAALRS LNKSEIAGKR IKLEPSRPGG TRRSLVQHLG HELEDEPRGY RHSHVGSPMA
401: NSPPGAWAQY GSPTDNNLLH AFSNSPTGNG MSPIGMSPSM MSNALKIAPI GKDNNWSKYD QVFSNSNQSL GAAFQHSQSY QDRKSDHMSS SPGTLTGPEF
501: LWGSPKPYPE HSQSSSMWRP PPVGHAMSSS SRPQGQGFLY GSRQASLFGS LDQNRHHVGS APSGAPFESH FGFLPESPET SFMNQVRFAN MGNIGGANRN
601: GGSLMLNMAS RASLNPVSAL SGSLTDNNST NFRPVPSPRL GQPPFFGNTT YQGPGYYGLD SSTIERGRNR RVDSSAFQAD SKKQYQLDLD KIRKGEDTRT
701: TLMIKNIPNK YTSKMLLAAI DELHKGTYDF FYLPIDFKNK CNVGYAFINM ISPVHIVSFY QAFNGKKWEK FNSEKVASLA YGRIQGRNAL ISHFQNSSLM
801: NEDKRCRPIL FHSNGPETGN QEPFPNGICI HMPLDGGAGS SKEPLGFEED DNPNEIKISG EKSMVGSL
Best Arabidopsis Sequence Match ( AT1G29400.3 )
(BLAST)
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.