Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G003100.1 | Wheat | plastid | 97.37 | 98.27 |
| TraesCS7D01G003000.1 | Wheat | plastid | 96.8 | 97.47 |
| HORVU7Hr1G000370.12 | Barley | nucleus, plastid | 95.89 | 94.59 |
| Os02t0719800-02 | Rice | plasma membrane | 79.91 | 82.55 |
| EER89028 | Sorghum | nucleus | 77.85 | 80.71 |
| Zm00001d045611_P001 | Maize | nucleus | 76.6 | 79.22 |
| Zm00001d035869_P017 | Maize | golgi | 75.8 | 77.84 |
| GSMUA_Achr10P... | Banana | nucleus | 55.82 | 58.01 |
| VIT_10s0003g02670.t01 | Wine grape | nucleus | 57.65 | 57.13 |
| KRH37781 | Soybean | nucleus | 54.68 | 55.57 |
| KRH12823 | Soybean | nucleus | 54.57 | 55.45 |
| PGSC0003DMT400007982 | Potato | nucleus | 51.94 | 53.47 |
| Solyc02g071270.1.1 | Tomato | extracellular | 49.2 | 50.89 |
| GSMUA_Achr6P13670_001 | Banana | nucleus | 34.82 | 49.35 |
| GSMUA_Achr4P31220_001 | Banana | plastid | 50.46 | 49.11 |
| GSMUA_Achr6P13690_001 | Banana | golgi, plasma membrane | 57.08 | 36.36 |
| GSMUA_Achr3P03100_001 | Banana | nucleus | 54.22 | 35.77 |
| GSMUA_Achr2P20130_001 | Banana | nucleus | 49.66 | 35.42 |
| TraesCS2A01G287900.4 | Wheat | nucleus | 36.53 | 34.67 |
| TraesCS1A01G005800.2 | Wheat | nucleus | 33.56 | 30.34 |
| TraesCS6A01G131000.1 | Wheat | mitochondrion | 4.91 | 24.43 |
| TraesCS3A01G413400.1 | Wheat | nucleus | 15.53 | 20.0 |
| TraesCS5A01G319000.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 4.0 | 14.0 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:MEI2-like_RRM3 | InterPro:MEI2_like_RRM1 | InterPro:Mei2-like_Rrm_C | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFAM:PF04059 | PFscan:PS50102 | PANTHER:PTHR44127 | PANTHER:PTHR44127:SF5 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | EnsemblPlantsGene:TraesCS4A01G495500 | EnsemblPlants:TraesCS4A01G495500.1 | TIGR:cd12524 | TIGR:cd12529 |
| TIGR:cd12531 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:742548913..742553283
Molecular Weight (calculated)
95974.0 Da
IEP (calculated)
6.685
GRAVY (calculated)
-0.676
Length
876 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSPAPLSP PGFAVPLAVK KRQQAPPGYS SPWGAPPAPP LTNNNPNPPN GLRGGGDTSI FSTSLPVLPH EKLNFPDSAH GTPSMDDTSA KLKDFDDDPQ
101: GNDYPFDFDL RQIDDLLPDE DELFAGITNG IEPAGQTNPA EELEEFDVFG SGGGMELDSD PLDSITVGLG NASIGDGLRA NGVNNNFGLS NSPGAVAGEH
201: PLGEHPSRTL FVRNINSNVE DSELRSLFEQ FGDIRTLYTA TKHRGFVMIS YFDIRAARGA MRSLQNKPLR RRKLDIHFSI PKENPSDKDL NQGTLVIFNL
301: DPSVSNEEVR QIFGTYGEVK EIRETPNKKH HKFIEFYDVR AAEAALRSLN KSEIAGKRIK LEPSRPGGTR RSLVQHLGHE LEQDEPRGYR HSHVGSPMAN
401: SPPGAWAQYG SPTDNNLLHA FSNSPTGNGM SPIGMSPSMM SNALKIAPIG KDNNWSKYDQ VFSNSNQSLG AAFQHSQSYQ DRKSEHMSSS PGTLTGPEFL
501: WGSPKPYPEH SQSSSMWRPP PVGHAMSSSS RPQGQGFLYG SRQASLFGSL DQNRHHVGSA PSGAPFESHF GFLPESPETS FMNQVRFANM GNIGGANRNG
601: GSLMLNMASR ASLNPVSALS GSLTDNNSTN FRPVPSPRLG QPPFFGNTTY QGPGYYGLDS SSIERGRNRR VDSSAFQADS KKQYQLDLDK IRKGEDTRTT
701: LMIKNIPNKY TSKMLLAAID ELHKGTYDFF YLPIDFKNKC NVGYAFINMI SPVHIVSFYQ AFNGKKWEKF NSEKVASLAY GRIQGRNALI SHFQNSSLMN
801: EDKRCRPILF HSNGPETGNQ CSNTMNETQE PFPNGICIHM PLDGGAGSSK EPLGFEEDDN PNEMKISGEK SMAGSL
101: GNDYPFDFDL RQIDDLLPDE DELFAGITNG IEPAGQTNPA EELEEFDVFG SGGGMELDSD PLDSITVGLG NASIGDGLRA NGVNNNFGLS NSPGAVAGEH
201: PLGEHPSRTL FVRNINSNVE DSELRSLFEQ FGDIRTLYTA TKHRGFVMIS YFDIRAARGA MRSLQNKPLR RRKLDIHFSI PKENPSDKDL NQGTLVIFNL
301: DPSVSNEEVR QIFGTYGEVK EIRETPNKKH HKFIEFYDVR AAEAALRSLN KSEIAGKRIK LEPSRPGGTR RSLVQHLGHE LEQDEPRGYR HSHVGSPMAN
401: SPPGAWAQYG SPTDNNLLHA FSNSPTGNGM SPIGMSPSMM SNALKIAPIG KDNNWSKYDQ VFSNSNQSLG AAFQHSQSYQ DRKSEHMSSS PGTLTGPEFL
501: WGSPKPYPEH SQSSSMWRPP PVGHAMSSSS RPQGQGFLYG SRQASLFGSL DQNRHHVGSA PSGAPFESHF GFLPESPETS FMNQVRFANM GNIGGANRNG
601: GSLMLNMASR ASLNPVSALS GSLTDNNSTN FRPVPSPRLG QPPFFGNTTY QGPGYYGLDS SSIERGRNRR VDSSAFQADS KKQYQLDLDK IRKGEDTRTT
701: LMIKNIPNKY TSKMLLAAID ELHKGTYDFF YLPIDFKNKC NVGYAFINMI SPVHIVSFYQ AFNGKKWEKF NSEKVASLAY GRIQGRNALI SHFQNSSLMN
801: EDKRCRPILF HSNGPETGNQ CSNTMNETQE PFPNGICIHM PLDGGAGSSK EPLGFEEDDN PNEMKISGEK SMAGSL
001: MDIPHEAEAG AWGILPGFGR HHHPSSDATL FSSSLPVFPR GKLQLSDNRD GFSLIDDTAV SRTNKFNESA DDFESHSIGN LLPDEEDLLT GMMDDLDLGE
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
101: LPDADDYDLF GSGGGMELDA DFRDNLSMSG PPRLSLSSLG GNAIPQFNIP NGAGTVAGEH PYGEHPSRTL FVRNINSNVE DSELTALFEQ YGDIRTLYTT
201: CKHRGFVMIS YYDIRSARMA MRSLQNKPLR RRKLDIHFSI PKDNPSEKDM NQGTLVVFNL DPSISNDDLH GIFGAHGEIK EIRETPHKRH HKFVEFYDVR
301: GAEAALKALN RCEIAGKRIK VEPSRPGGAR RSLMLQLNQD LENDDLHYLP MIGSPMANSP PMQGNWPLNS PVEGSPLQSV LSRSPVFGLS PTRNGHLSGL
401: ASALNSQGPS SKLAPIGRGQ IGSNGFQQSS HLFQEPKMDN KYTGNLSPSG PLISNGGGIE TLSGSEFLWG SPNARSEPSS SSVWSTSSTG NPLFSTRVDR
501: SVPFPHQHQN QSRSHHHFHV GSAPSGVPLE KHFGFVPESS KDALFMNTVG LQGMSGMGLN GGSFSSKMAN NGIINSGSMA ENGFSSYRMM SSPRFSPMFL
601: SSGLNPGRFA SGFDSLYENG RPRRVENNSN QVESRKQFQL DLEKILNGED SRTTLMIKNI PNKYTSKMLL AAIDEKNQGT YNFLYLPIDF KNKCNVGYAF
701: INMLNPELII PFYEAFNGKK WEKFNSEKVA SLAYARIQGK SALIAHFQNS SLMNEDMRCR PIIFDTPNNP ESVEQVVDEE SKNMDLLDSQ LSDDDGRERS
Arabidopsis Description
ML5Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.